Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4671
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 433 e-122
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 409 e-115
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 326 2e-90
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 234 9e-63
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 234 9e-63
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 218 7e-58
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 213 3e-56
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 212 4e-56
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 202 5e-53
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 156 3e-39
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 30 0.34
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 30 0.45
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.78
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.78
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.4
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 5.5
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 5.5
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 26 5.5
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 26 7.3
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 7.3
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 25 9.6
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 433 bits (1066), Expect = e-122
Identities = 191/233 (81%), Positives = 213/233 (91%)
Frame = +2
Query: 107 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 286
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF+SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 287 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 466
HGQYYDLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 467 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 646
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+DEKIF HGGLSPDL +M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 647 IPRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENHRGVSFTFGTEVGGKFLSK 805
I RIMRPTDVPD GLLCDLLWSDPDKD GWG+N RGVSFTFG +V +FL K
Sbjct: 185 IQRIMRPTDVPDTGLLCDLLWSDPDKDLTGWGDNDRGVSFTFGPDVVSRFLHK 237
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 409 bits (1008), Expect = e-115
Identities = 179/233 (76%), Positives = 205/233 (87%)
Frame = +2
Query: 107 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 286
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IFLSQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 287 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 466
HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 467 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 646
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+PVAA++DEKIFC HGGLSPDL +++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 647 IPRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENHRGVSFTFGTEVGGKFLSK 805
I RI+RPTD+PD GLLCDL+WSDP+KD GWGEN RGVS+TFG +V +FL K
Sbjct: 182 IQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQK 234
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 326 bits (801), Expect = 2e-90
Identities = 152/233 (65%), Positives = 175/233 (75%), Gaps = 1/233 (0%)
Frame = +2
Query: 110 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 286
LN+D +I++L+ V K +V L EI +C+ REIFLSQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 287 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 466
HGQY DL+RLFE GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 467 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 646
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLP+A++V KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 647 IPRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENHRGVSFTFGTEVGGKFLSK 805
I I RPTDVPD GLL DLLWSDP W +N RGVSF F V +FL+K
Sbjct: 370 IREIPRPTDVPDYGLLNDLLWSDPADTENDWEDNERGVSFVFNKNVIRQFLAK 422
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 234 bits (573), Expect = 9e-63
Identities = 97/207 (46%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +2
Query: 179 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 358
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 359 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 535
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 536 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIPRIMRPTDVPDQGLLCDLLWSD 715
WK FT+ F+ P+ A+++++IFC HGGLSP + +++ + + R +VP +G +CDLLWSD
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSD 215
Query: 716 PDKDTAGWGENHRGVSFTFGTEVGGKF 796
PD D GWG + RG +TFG ++ F
Sbjct: 216 PD-DRCGWGISPRGAGYTFGQDISETF 241
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 234 bits (573), Expect = 9e-63
Identities = 97/207 (46%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +2
Query: 179 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 358
L+E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 359 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 535
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 536 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIPRIMRPTDVPDQGLLCDLLWSD 715
W+ FTD F+ LP+ A+++++IFC HGGLSP + ++ + + R +VP +G +CDLLWSD
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSD 202
Query: 716 PDKDTAGWGENHRGVSFTFGTEVGGKF 796
PD D GWG + RG +TFG ++ F
Sbjct: 203 PD-DRPGWGISPRGAGYTFGPDIAEAF 228
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 218 bits (533), Expect = 7e-58
Identities = 98/207 (47%), Positives = 137/207 (66%), Gaps = 1/207 (0%)
Frame = +2
Query: 179 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 358
+ E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 359 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 535
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANV 138
Query: 536 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIPRIMRPTDVPDQGLLCDLLWSD 715
W+ + F+ L + A+VD K+FC HGGLSP + +++QI + R +VP +G +CDLLWSD
Sbjct: 139 WRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSD 198
Query: 716 PDKDTAGWGENHRGVSFTFGTEVGGKF 796
P+ D +GWG + RG F FG +V F
Sbjct: 199 PE-DISGWGLSPRGAGFLFGADVSEVF 224
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 213 bits (519), Expect = 3e-56
Identities = 93/207 (44%), Positives = 135/207 (65%), Gaps = 1/207 (0%)
Frame = +2
Query: 179 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 358
L E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 359 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 535
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 536 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIPRIMRPTDVPDQGLLCDLLWSD 715
WK F+ L +AA++D KI C HGGLSP+++ ++QI + R ++P +G CDL+WSD
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSD 196
Query: 716 PDKDTAGWGENHRGVSFTFGTEVGGKF 796
P+ D W + RG + FG++V +F
Sbjct: 197 PE-DIESWTVSPRGAGWLFGSKVTTEF 222
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 212 bits (518), Expect = 4e-56
Identities = 101/231 (43%), Positives = 147/231 (63%), Gaps = 1/231 (0%)
Frame = +2
Query: 110 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 289
+++DN+I++L + + + E I LC ++E+ + + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 290 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 469
GQ+ DLL +F GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 470 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 646
I + YGFY EC R+Y N +WK FTD F+ L ++A +D+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 647 IPRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENHRGVSFTFGTEVGGKFL 799
I + R + P +G + DL+WSDPD + + RG F+FG + KFL
Sbjct: 174 ILVLDRFREFPHEGPMADLVWSDPDPSVQEFSLSPRGAGFSFGEVIVTKFL 224
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 202 bits (493), Expect = 5e-53
Identities = 92/184 (50%), Positives = 126/184 (68%)
Frame = +2
Query: 176 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 355
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 356 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 535
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 536 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIPRIMRPTDVPDQGLLCDLLWSD 715
++ FN LP+AAI++++ C HGGLSP+L + I I R + P GL+CDLLWSD
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 716 PDKD 727
P +D
Sbjct: 264 PLED 267
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 156 bits (379), Expect = 3e-39
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 8/201 (3%)
Frame = +2
Query: 218 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 382
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 383 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 562
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 563 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIPRIMR-PTDVPDQ-GLLCDLLWSDPDKDTA 733
LP+ +++ + HGGL S D ++Q+ I R P Q GL+ ++LW+DP +
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAP 370
Query: 734 GWGENHRGVSFTFGTEVGGKF 796
G G + RGV FG +V +F
Sbjct: 371 GRGPSKRGVGLQFGPDVSKRF 391
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.3 bits (65), Expect = 0.34
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 345 DSGGKPPYSNNLKRS*YCPCMSPQIFKGASSSSSIGCDKNISLDFKHSPL-ISISVN*TF 169
DS PP + + P P I ++SSS + NIS + + S + S+S N
Sbjct: 157 DSVNSPPSYGIMASATNQPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVL 216
Query: 168 IPGFSPRTFSNFFITLSMFNSSVSLSAIGY 79
P SP++ S + +S N VS +A Y
Sbjct: 217 DPA-SPKSVSPDLVYVSSDNPPVSTAASAY 245
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.45
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 65 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQP 241
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ + P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 242 ILLELEAPLKICGD 283
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.78
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 551 DCFNCLPVAAIVDEKIFCC-HGGLSPD 628
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.78
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 188 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 349
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 350 YLFLGDYVDRGKQSLETICL 409
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 143 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 3
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 428 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 571
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 285 MSPQIFKGASSSSSIGCDKNISLD 214
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 445 EILGIFNLVGEEQAYCFQGLLATVHIVSKEEIVG 344
EIL I + E C QGL IV KE VG
Sbjct: 258 EILEILDTAEETLRSCIQGLNIDAKIVRKERSVG 291
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 725 DTAGWGENHRGVSFTFGTEV 784
D GWG + GVS FGT +
Sbjct: 134 DDGGWGIHTEGVSTVFGTSM 153
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 329 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 433
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 9.6
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 285 MSPQIFKGASSSSSIGCDKNISLDFKHSPLISISVN*TFIPGFSPRTFS 139
+SP F + +I +++SL K P+++ S + + PGFS TF+
Sbjct: 266 ISPASFGSGIRTRNIFNPESMSLGLK-PPILNRSYSASMAPGFSMNTFT 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,360,843
Number of Sequences: 5004
Number of extensions: 71100
Number of successful extensions: 216
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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