Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4669
         (407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   1.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   4.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   7.5  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    22   9.9  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    22   9.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    22   9.9  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 45  LKSRTVTSFGPTNRQ-GAPAA-VHVRHG*RLQPAADSQVPDVVLGADRW 185
           L++   +SFGP  R+ G+P   +H R G  ++  A        L   RW
Sbjct: 379 LRTVRASSFGPMRRRSGSPTLHIHCRRGLTIETGARCSTAAFFLFLARW 427


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 217 NNITVSPLYSLQRSAPSTTSGTWLSAA 137
           N +TVS  ++L  S    T+GT ++ A
Sbjct: 334 NRLTVSDNHNLSNSGSGNTAGTIITPA 360


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 184 QRSAPSTTSGTWLSAAGWSRHPWRT 110
           QR   +TTSG+W      +  PW T
Sbjct: 860 QREWSTTTSGSWTRRLIPNIQPWIT 884


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 209 YGVALVQSPTVCTEHDIWDLAIG 141
           YG+ L   PT  TE   +DL  G
Sbjct: 8   YGIELRDPPTAPTELTQYDLLFG 30


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 230 WVHVEQYYGVALV 192
           WVHV+ Y G A +
Sbjct: 274 WVHVDAYAGSAFI 286


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 230 WVHVEQYYGVALV 192
           WVHV+ Y G A +
Sbjct: 305 WVHVDAYAGSAFI 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,909
Number of Sequences: 2352
Number of extensions: 9428
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)