Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4663
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.49 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.49 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   4.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 626  QFLLAGSLLRDG-NSQGGGTYPCGPQNAQ 543
            Q L +G L+     SQ GG Y C  +NAQ
Sbjct: 1362 QILPSGELMLSNLQSQDGGDYTCQVENAQ 1390


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 626  QFLLAGSLLRDG-NSQGGGTYPCGPQNAQ 543
            Q L +G L+     SQ GG Y C  +NAQ
Sbjct: 1358 QILPSGELMLSNLQSQDGGDYTCQVENAQ 1386


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 131 WETRDGDKVKGKAS 90
           W  RDG+K KGK S
Sbjct: 3   WINRDGEKWKGKMS 16


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 626 QFLLAGSLLRDGNSQGGGTYPCGPQNAQLPV 534
           +F+L  SLL  GN    G    G Q  Q P+
Sbjct: 4   EFVLLASLLYLGNESVHGIQKWGTQFGQAPL 34


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   TICPANIELLPYASIKLMQ-LHNVF 74
           T CP N + L Y  IK M+ L  VF
Sbjct: 336 TFCPKNNKELKYDDIKEMEYLDKVF 360


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 263 IDMSIQIDLNIIVSFKEYG 319
           +D+++ +DL+I  + +EYG
Sbjct: 676 VDVTLPLDLHIQNAIREYG 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,633
Number of Sequences: 438
Number of extensions: 4180
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)