Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4662
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p pro...    40   0.003
AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-P...    40   0.003
AE013599-3899|ABI31114.1|  156|Drosophila melanogaster CG13586-P...    40   0.004
AY069305-1|AAL39450.1|  501|Drosophila melanogaster HL07974p pro...    29   7.6  
AE014298-2024|AAF48363.1|  501|Drosophila melanogaster CG1461-PA...    29   7.6  

>AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p
           protein.
          Length = 119

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 14  LFREPQLYTLCRKDCFTTDYFKGCVEVLR-ETDQLDLFKKYIKQIHGA 154
           LFRE  ++ LC+KDCF + +F  C++VL    +++   + +++ ++G+
Sbjct: 62  LFRETSIHRLCKKDCFDSKWFGECLKVLLIPEEEISNLQHFLRVVNGS 109


>AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-PA,
           isoform A protein.
          Length = 156

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 14  LFREPQLYTLCRKDCFTTDYFKGCVEVLR-ETDQLDLFKKYIKQIHGA 154
           LFRE  ++ LC+KDCF + +F  C++VL    +++   + +++ ++G+
Sbjct: 99  LFRETSIHRLCKKDCFDSKWFGECLKVLLIPEEEISNLQHFLRVVNGS 146


>AE013599-3899|ABI31114.1|  156|Drosophila melanogaster CG13586-PB,
           isoform B protein.
          Length = 156

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +2

Query: 14  LFREPQLYTLCRKDCFTTDYFKGCVEVLR-ETDQLDLFKKYIKQIHGA 154
           LFRE  ++ LC+ +CF  + F  C++VL  + +++   + Y+K I+G+
Sbjct: 99  LFRETSIHRLCKANCFVHETFGDCLKVLLIDDEEISQLQHYLKVINGS 146


>AY069305-1|AAL39450.1|  501|Drosophila melanogaster HL07974p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 71  YFKGCVEVLRETDQLDLFKKYIKQIHGADPGI*GGMLY 184
           YF G ++VL     L    K +KQ+ G DP +  G +Y
Sbjct: 377 YFDGVIDVLHSNAMLAY--KMLKQVRGLDPVMPNGAMY 412


>AE014298-2024|AAF48363.1|  501|Drosophila melanogaster CG1461-PA
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 71  YFKGCVEVLRETDQLDLFKKYIKQIHGADPGI*GGMLY 184
           YF G ++VL     L    K +KQ+ G DP +  G +Y
Sbjct: 377 YFDGVIDVLHSNAMLAY--KMLKQVRGLDPVMPNGAMY 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,515,687
Number of Sequences: 53049
Number of extensions: 507401
Number of successful extensions: 1131
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)