Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4661
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027002-1|BAB15620.1|  674|Homo sapiens protein ( Homo sapiens ...    30   6.2  
BC012726-1|AAH12726.2|  777|Homo sapiens DDX31 protein protein.        30   8.2  
AL354735-2|CAI16565.1|  775|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AL354735-1|CAI16564.1|  851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AL160165-3|CAH70532.1|  775|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AL160165-2|CAH70531.1|  851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AL160165-1|CAH70530.1|  585|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AK027484-1|BAB55146.1|  585|Homo sapiens protein ( Homo sapiens ...    30   8.2  
AK023695-1|BAB14644.1|  556|Homo sapiens protein ( Homo sapiens ...    30   8.2  
AF427339-1|AAL26549.1|  851|Homo sapiens DEAD/DEXH helicase DDX3...    30   8.2  
AF335569-1|AAQ14890.1|  758|Homo sapiens helicain C protein.           30   8.2  
AF335568-1|AAQ14889.1|  851|Homo sapiens helicain B protein.           30   8.2  

>AK027002-1|BAB15620.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23349 fis, clone HEP13913. ).
          Length = 674

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 313 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHCSLFLQTLLSSSGAPAS 366


>BC012726-1|AAH12726.2|  777|Homo sapiens DDX31 protein protein.
          Length = 777

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 416 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 469


>AL354735-2|CAI16565.1|  775|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 31 protein.
          Length = 775

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AL354735-1|CAI16564.1|  851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 31 protein.
          Length = 851

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AL160165-3|CAH70532.1|  775|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 31 protein.
          Length = 775

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AL160165-2|CAH70531.1|  851|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 31 protein.
          Length = 851

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AL160165-1|CAH70530.1|  585|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 31 protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AK027484-1|BAB55146.1|  585|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14578 fis, clone NT2RM4001178, weakly similar to
           PROBABLE ATP-DEPENDENT RNA HELICASE HAS1. ).
          Length = 585

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AK023695-1|BAB14644.1|  556|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13633 fis, clone PLACE1011114, weakly similar to
           PROBABLE ATP-DEPENDENT RNA HELICASE HAS1. ).
          Length = 556

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 195 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 248


>AF427339-1|AAL26549.1|  851|Homo sapiens DEAD/DEXH helicase DDX31
           protein.
          Length = 851

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AF335569-1|AAQ14890.1|  758|Homo sapiens helicain C protein.
          Length = 758

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


>AF335568-1|AAQ14889.1|  851|Homo sapiens helicain B protein.
          Length = 851

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 185 AKSRILVKKAFIFRK*RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVS 358
           +K R++   AFI +K +F   QK+    ++ F+  E+   H  L L+T +S S    S
Sbjct: 490 SKLRLVCLAAFILQKCKFEEDQKM----VVFFSSCELVEFHYSLFLQTLLSSSGAPAS 543


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,851,032
Number of Sequences: 237096
Number of extensions: 1401568
Number of successful extensions: 1578
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)