Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4658
(570 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0255 + 22435027-22435072,22436022-22437085 31 0.063
02_01_0007 - 48497-48880 33 0.16
03_04_0187 - 18236041-18236643 33 0.21
10_08_0885 - 21290394-21291347 32 0.37
07_03_1094 + 23919878-23920520,23921297-23921363,23921364-239214... 32 0.37
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 31 0.85
04_04_0734 + 27648661-27649596 31 0.85
03_04_0188 - 18241815-18242477 31 0.85
02_05_0202 + 26708049-26709074 31 0.85
07_03_1165 - 24459156-24460139 30 1.5
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 29 2.6
04_03_0904 + 20717005-20718087 29 2.6
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 29 2.6
01_05_0213 - 19355785-19356522 29 2.6
12_02_0916 - 24271151-24271894 29 3.4
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 29 3.4
03_05_0291 - 22837412-22838128 29 3.4
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 29 3.4
09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645 28 6.0
03_06_0063 - 31391870-31392679 28 6.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 6.0
02_05_0201 + 26687369-26689228 28 6.0
12_02_0674 - 21745321-21746223,21746229-21747608 27 8.0
07_03_1104 + 24001594-24002139 27 8.0
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 31.1 bits (67), Expect(2) = 0.063
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIY--HRRQRNPPP 180
C LC+K F + SL H +++ RR++ PPP
Sbjct: 26 CKLCNKSFPSYCSLGGHMNLHSTRRRKKKPPP 57
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +1
Query: 25 PRG*PSSATREQQHLQPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLS 204
P+ P A+ + + A C LC K F + ++L+ H + R + Q +
Sbjct: 86 PQSQPDHASSDDEPWTLAPKAECQLCFKAFHSCDALSMHMKAHGHHGRKMVMVEQRASRK 145
Query: 205 TA 210
T+
Sbjct: 146 TS 147
Score = 22.2 bits (45), Expect(2) = 0.063
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 160 RQRNPPPLSQPQNLSTAPEP 219
RQR P SQP + S+ EP
Sbjct: 80 RQRPVAPQSQPDHASSDDEP 99
>02_01_0007 - 48497-48880
Length = 127
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +1
Query: 46 ATREQQHLQPLHSAR---CTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLS-QPQ-NLSTA 210
A R+QQ + AR C C + FR+ +L H ++ HRR R L+ QP L +
Sbjct: 13 AWRQQQLILQAKKARSYPCGFCRREFRSAQALGGHMNV-HRRDRARLRLTHQPDAALIAS 71
Query: 211 PEPKLNPP 234
P K PP
Sbjct: 72 PSTKSTPP 79
>03_04_0187 - 18236041-18236643
Length = 200
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEP 219
RC++C K F + +L HK+ + R PP + P ++ AP P
Sbjct: 49 RCSVCGKAFPSHQALGGHKASH----RKPPTAALPMHVIDAPPP 88
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYH 156
RC++CH+ F T +L HK ++
Sbjct: 110 RCSVCHRTFATGQALGGHKRCHY 132
>10_08_0885 - 21290394-21291347
Length = 317
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRN---PPPLSQPQNLSTAP 213
+C C KVFR+ +L H++ R + PPP P + + AP
Sbjct: 197 QCGACRKVFRSYQALGGHRASLKRGKGGGCVPPPRPAPASSAAAP 241
>07_03_1094 +
23919878-23920520,23921297-23921363,23921364-23921453,
23922220-23922284,23922372-23922470,23922851-23922992,
23923100-23923139
Length = 381
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 70 QPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQP 192
+P H C++C KV+ + +L HK+ HR+ P P ++P
Sbjct: 82 KPQHGYECSVCGKVYGSYQALGGHKT-SHRKP--PSPAAEP 119
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 30.7 bits (66), Expect = 0.85
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPP 177
C CHK F+++++++ H S ++R P
Sbjct: 1397 CASCHKTFKSIHNISEHSSQCEEKRRTDP 1425
>04_04_0734 + 27648661-27649596
Length = 311
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRN---PPPLSQPQNLSTAPEP 219
+C C KVFR+ +L H++ + R R PP + P + +T +P
Sbjct: 175 QCPACKKVFRSYQALGGHRASHMRGGRGGCCAPPPNPPPSPATPLQP 221
>03_04_0188 - 18241815-18242477
Length = 220
Score = 30.7 bits (66), Expect = 0.85
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNP 174
RCT+C K F + +L HKS HR+ +P
Sbjct: 74 RCTVCGKAFASYQALGGHKS-SHRKPPSP 101
>02_05_0202 + 26708049-26709074
Length = 341
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRN---PPPLSQPQNLSTAPEPKLNPP 234
+C C KVFR+ +L H++ + R R PP++ P P+P PP
Sbjct: 199 QCPACKKVFRSYQALGGHRASHVRGGRGGCCAPPVAPP------PQPHPQPP 244
>07_03_1165 - 24459156-24460139
Length = 327
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNPP 234
C LC+K F + +++ H ++H + P+S P ++ P+ P
Sbjct: 115 CHLCNKEFGSRKAVHGHMRVHH-AENEKEPMSLPPQVAAPVHPQARLP 161
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNPPHHNI 246
C C K FR+ N+L H S + P S P + P L+ N+
Sbjct: 120 CNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNL 171
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 169 NPPPLSQPQNLSTAPEPKLNPP 234
NPPP +P + P+PK NPP
Sbjct: 237 NPPPTYKPAPPTYKPQPKPNPP 258
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 172 PPPLSQPQNLSTAPEPKLNPPHHNIDFYKFKDQFNV*QHPSAGSFSLYD 318
PPP SQ N+S+ ++ P ++D D F+ PS GS S+ D
Sbjct: 53 PPPHSQ--NISSTSSSNISLPTPSLDLPDVADLFSSPSLPSRGSTSMMD 99
>01_05_0213 - 19355785-19356522
Length = 245
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 172 PPPLSQPQNLSTAPEPKLNPPHHN 243
PPPLS P + + +P P +P +H+
Sbjct: 31 PPPLSPPYSPAQSPPPPTSPAYHD 54
>12_02_0916 - 24271151-24271894
Length = 247
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNPPP 180
RC++C K F + +L HK+ + R PPP
Sbjct: 92 RCSVCGKAFASYQALGGHKASH----RKPPP 118
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 506 SSPALECSRGEDHRRPHSLRLQRTNEC 426
S P +E SRG D HSLRLQR + C
Sbjct: 23 SPPGMEMSRGMDR---HSLRLQRPSFC 46
>03_05_0291 - 22837412-22838128
Length = 238
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 73 PLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLS 186
P C++C +VF + +L HK+ + R R PP ++
Sbjct: 85 PQEQHGCSVCGRVFSSYQALGGHKTSH--RPRTPPTMA 120
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 116 RKTLWQSVQRAECSGWRCCCSRV 48
R + W SV A C+G CC SR+
Sbjct: 175 RPSQWNSVSPAACTGVGCCQSRI 197
>09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645
Length = 375
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 76 LHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQP 192
L A C CH+VF + ++ + + H+ + +P P +P
Sbjct: 95 LARAECMHCHQVFNSNSTNGTSRLLKHQAKCSPHPQKRP 133
>03_06_0063 - 31391870-31392679
Length = 269
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNP 231
+C++C K F + +L HK+ + R + P P + P L+ AP L P
Sbjct: 98 KCSVCGKSFSSYQALGGHKTSH--RVKLPTPPAAPV-LAPAPVAALLP 142
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 172 PPPLSQPQNLSTAPEPKLNPP 234
PPP P L+TAP+P PP
Sbjct: 358 PPPPPPPPKLNTAPKPPPPPP 378
>02_05_0201 + 26687369-26689228
Length = 619
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQ 195
C++CH+VF + +L HK + PL++ Q
Sbjct: 434 CSICHRVFTSGQALGGHKRCHWLTSGATDPLTKLQ 468
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 172 PPPLSQPQNLSTAPEPKLNPPHHNIDFYKF 261
PPPL P+ + +P P + PP + KF
Sbjct: 425 PPPLISPKEETPSPSPYIEPPKSSPPPVKF 454
>07_03_1104 + 24001594-24002139
Length = 181
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHR--RQRNPPPLSQPQNLSTAP 213
RC+LC K F + +L HK+ + + PP + ++ AP
Sbjct: 28 RCSLCGKAFASYQALGGHKASHRKPSAAAAAPPAHRDVVVAAAP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,750,552
Number of Sequences: 37544
Number of extensions: 256803
Number of successful extensions: 1123
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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