Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4658
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical p... 36 0.027
Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical pr... 36 0.027
AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat resp... 36 0.027
Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical pr... 35 0.036
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 32 0.25
Z82083-6|CAB04974.1| 388|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 31 0.58
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 31 0.58
U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical pr... 31 0.77
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.3
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 5.4
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 5.4
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 5.4
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 5.4
Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 27 7.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 27 7.2
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 27 7.2
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 27 7.2
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 27 7.2
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 27 7.2
AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical ... 27 7.2
AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical ... 27 7.2
AB071420-1|BAB86940.1| 401|Caenorhabditis elegans 2-amino-3-car... 27 7.2
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 9.5
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 27 9.5
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 27 9.5
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 27 9.5
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 27 9.5
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 9.5
>Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPP 177
CT+C KV+ NS++ H +IYH RNPP
Sbjct: 163 CTVCRKVYGRYNSVSYHVTIYH---RNPP 188
>Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPP 177
CT+C KV+ NS++ H +IYH RNPP
Sbjct: 163 CTVCRKVYGRYNSVSYHVTIYH---RNPP 188
>AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat
responsive protein protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPP 177
CT+C KV+ NS++ H +IYH RNPP
Sbjct: 163 CTVCRKVYGRYNSVSYHVTIYH---RNPP 188
>Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical
protein F10B5.3 protein.
Length = 471
Score = 35.1 bits (77), Expect = 0.036
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRRQRNPP 177
CT+C K++ NS++ H +IYH RNPP
Sbjct: 257 CTVCRKIYGRYNSVSYHVTIYH---RNPP 282
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 7 CAASCCPRG*PSSATREQQHLQPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLS 186
C+ S C +G T HL+ +H+ T C K F + S N H S N P L
Sbjct: 112 CSKSFCDKGALKIHT-SAVHLREMHTCTVTGCGKQFSSRRSRNRHSS------NNNPKLH 164
Query: 187 QPQNLS 204
P++L+
Sbjct: 165 MPESLT 170
>Z82083-6|CAB04974.1| 388|Caenorhabditis elegans Hypothetical
protein ZK1010.8 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 70 QPLHSARCTLCH--KVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNPPHHN 243
+P HS R H K++ N H+ +HR P++ PQ PEP P+
Sbjct: 181 RPKHSRRRRRNHVSKIYLDPNDARRHQKHHHRSHSYSRPVAPPQLQLAPPEPVTAAPYLA 240
Query: 244 ID 249
+D
Sbjct: 241 LD 242
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 61 QHL-QPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNP 174
+HL + LH C C K+F N+L +H + R+ NP
Sbjct: 347 EHLKEKLHRNECIYCEKIFPDRNTLMDHMRKRNHREVNP 385
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 22 CPRG*PSSATREQQHLQPLHSAR---CTLCHKVFRTLNSLNNHKSIY 153
CP+ SS QQH Q H+ + C C K FR ++L H+S++
Sbjct: 25 CPKSF-SSTKLLQQHQQMFHTDKAFICETCGKAFRFRSNLAEHRSVH 70
>U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical
protein K10B3.5 protein.
Length = 609
Score = 30.7 bits (66), Expect = 0.77
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNP 174
+CT+C +F T+ +N H HR++ P
Sbjct: 352 KCTICADIFATIGLINKHLVTEHRKETVP 380
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 61 QHLQPLHSARCTLCHKVFRTLNSLNNHKSIYHRR 162
+HL P S C CHK FRT L+ H ++ R+
Sbjct: 615 RHL-PRKSHLCWTCHKSFRTAQLLSLHAEVHDRQ 647
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 172 PPPLSQPQNLSTAPEPKLNPP 234
PPP PQNLS AP P PP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPP 583
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQN 198
RC C +F+T N L H+ H PLS P+N
Sbjct: 364 RCDTCRTMFKTRNQLRQHRQDVH----GVLPLSTPRN 396
>Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical
protein R07E5.5 protein.
Length = 124
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 64 HLQPLHSARCTLCHKVFRTLNSLNNHKSIYHR 159
H +S C LC K F+T L HK Y R
Sbjct: 21 HFYRKNSGTCDLCEKNFKTSEELVEHKKNYPR 52
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 82 SARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQ 195
S +CT C K ++T + L+NH H++ + PQ
Sbjct: 270 SYKCTYCSKRYKTSSGLSNHMMSSHQKISDVQDAPTPQ 307
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 91 CTLCHKVFRTLNS-LNNHKSIYHRRQRN 171
C +C K F+T+N+ LN+ S H RQ N
Sbjct: 318 CVVCSKSFKTVNAKLNHENSKQHIRQLN 345
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 91 CTLCHKVFRTLNSLNNHKSIYHRR 162
CT+C F+ NSL HK ++ R+
Sbjct: 142 CTVCQMTFKWKNSLKCHKDMHQRK 165
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +1
Query: 61 QHLQPLHSAR-----CTLCHKVFRTLNSLNNHKSIYH 156
+HL HS R C C K+F T + LN H ++YH
Sbjct: 400 RHLMTKHSRRSKDFKCDTCSKLFFTESELNRH-AVYH 435
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +1
Query: 169 NPPPLSQPQNLSTAPEP------KLNPPHHNIDFYKFK 264
NPP S Q +T P PPH NIDFYK +
Sbjct: 2719 NPPAPSDLQEEATFPHAIEISWLPPTPPHGNIDFYKVR 2756
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +1
Query: 169 NPPPLSQPQNLSTAPEP------KLNPPHHNIDFYKFK 264
NPP S Q +T P PPH NIDFYK +
Sbjct: 2719 NPPAPSDLQEEATFPHAIEISWLPPTPPHGNIDFYKVR 2756
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +1
Query: 169 NPPPLSQPQNLSTAPEP------KLNPPHHNIDFYKFK 264
NPP S Q +T P PPH NIDFYK +
Sbjct: 2719 NPPAPSDLQEEATFPHAIEISWLPPTPPHGNIDFYKVR 2756
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +1
Query: 169 NPPPLSQPQNLSTAPEP------KLNPPHHNIDFYKFK 264
NPP S Q +T P PPH NIDFYK +
Sbjct: 2719 NPPAPSDLQEEATFPHAIEISWLPPTPPHGNIDFYKVR 2756
>Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.7 protein.
Length = 256
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNPPHHNIDFYK 258
+C +C V T L NH + HR++ P L+T ++PP I K
Sbjct: 78 KCPVCELVIPTEKGLKNHMNQKHRKKPIDP---STITLATTSPTMVSPPPKRIQLPK 131
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 118 TLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKL-NPPHHNIDFYKFKDQFNV*QHPS 294
T NS+N + + R R PP + Q+ S E + H + D + D NV +H +
Sbjct: 135 TSNSMNTSSDVSYGRNRAPPIVRPEQSDSEIDEQIFDDDDHRSRDTTRRCDSVNVPRHQN 194
Query: 295 AGSFS 309
S S
Sbjct: 195 DNSTS 199
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 160 RQRNPPPLSQPQNLSTAPEPKLNPPHH 240
R R PPP P P P PP H
Sbjct: 46 RNRGPPPFGPPPPWDRPPPPWRRPPWH 72
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYH 156
+C +C K F L +LN H+S +H
Sbjct: 185 KCEICGKGFCQLRTLNVHRSCHH 207
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 73 PLHSARCTLCHKVFRTLNSLNNHKSIYH 156
P H C C K F T+ +L+ HK+ H
Sbjct: 235 PKHPYACIECGKRFTTVTALSTHKARVH 262
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 73 PLHSARCTLCHKVFRTLNSLNNHKSIYH 156
P H C C K F T+ +L+ HK+ H
Sbjct: 353 PKHPYACIECGKRFTTVTALSTHKARVH 380
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 88 RCTLCHKVFRTLNSLNNHKSIYHRRQR 168
+C +CH+ F +LN HK ++ +++
Sbjct: 3 KCDICHQKFSNKTNLNRHKVMHSGKKK 29
>AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical
protein Y71D11A.3a protein.
Length = 352
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 505 PAPLWNVLVGRIIADHTPYDFKEQMNVLTK 416
P PL + VGR++ ++ P+ K++ ++L K
Sbjct: 305 PFPLGELEVGRVVEEYKPFSAKDREDLLWK 334
>AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical
protein Y71D11A.3b protein.
Length = 401
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 505 PAPLWNVLVGRIIADHTPYDFKEQMNVLTK 416
P PL + VGR++ ++ P+ K++ ++L K
Sbjct: 354 PFPLGELEVGRVVEEYKPFSAKDREDLLWK 383
>AB071420-1|BAB86940.1| 401|Caenorhabditis elegans
2-amino-3-carboxylmuconate-6-semialdehydedecarboxylase
protein.
Length = 401
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -3
Query: 505 PAPLWNVLVGRIIADHTPYDFKEQMNVLTK 416
P PL + VGR++ ++ P+ K++ ++L K
Sbjct: 354 PFPLGELEVGRVVEEYKPFSAKDREDLLWK 383
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 37 PSSATREQQHLQPLHSARCTLCHKVFRTLNSLNNHKSIYH 156
P A R++ S +C C K FR S NNH + H
Sbjct: 213 PMDALRKKFPYLKKRSPQCPFCDKRFRNDISFNNHLTKKH 252
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 470 DPPHENIPKRGWTAERCVTSHP 535
DPP IP+ W+ RC+ P
Sbjct: 356 DPPLTEIPEGEWSCPRCIIPEP 377
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 470 DPPHENIPKRGWTAERCVTSHP 535
DPP IP+ W+ RC+ P
Sbjct: 356 DPPLTEIPEGEWSCPRCIIPEP 377
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 121 LNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPE 216
L S+N ++YH Q +PP LS P + S PE
Sbjct: 227 LFSMNAMSALYHIAQNDPPTLS-PIDTSEQPE 257
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 58 QQHLQPLHSARCTLCHKVFRTLNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPEPKLNP 231
+QH + L C LC + + L H + H ++ PP S P + T P PK P
Sbjct: 229 KQHSRQLIMYGCALCATSYPSQLHLITHVQMSHDQETFYPP-SLP--IPTPPSPKSTP 283
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 121 LNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPE 216
L S+N ++YH Q +PP LS P + S PE
Sbjct: 227 LFSMNAMSALYHIAQNDPPTLS-PIDTSEQPE 257
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 121 LNSLNNHKSIYHRRQRNPPPLSQPQNLSTAPE 216
L S+N ++YH Q +PP LS P + S PE
Sbjct: 227 LFSMNAMSALYHIAQNDPPTLS-PIDTSEQPE 257
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 82 SARCTLCHKVFRTLNSLNNHKSIYH 156
S RC++C KVF +SL+ H+ H
Sbjct: 50 SFRCSICSKVFCHSSSLSRHRMQAH 74
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 470 DPPHENIPKRGWTAERCVTSHP 535
DPP IP+ W+ RC+ P
Sbjct: 356 DPPLTEIPEGEWSCPRCIIPEP 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,283,745
Number of Sequences: 27780
Number of extensions: 217179
Number of successful extensions: 933
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -