Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4636
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X96752-1|CAA65528.1| 314|Homo sapiens 3-hydroxyacyl-CoA dehydro... 38 0.026
BC000306-1|AAH00306.1| 314|Homo sapiens hydroxyacyl-Coenzyme A ... 38 0.026
AF095703-1|AAD13581.1| 314|Homo sapiens short chain L-3-hydroxy... 38 0.026
AF001903-1|AAB54009.1| 390|Homo sapiens 3-hydroxyacyl-CoA dehyd... 38 0.026
AF001902-1|AAB54008.1| 308|Homo sapiens 3-hydroxyacyl-CoA dehyd... 38 0.026
U04627-1|AAA56664.1| 763|Homo sapiens 78 kDa gastrin-binding pr... 37 0.061
D16480-1|BAA03941.1| 763|Homo sapiens enoyl-CoA hydratase/3-hyd... 37 0.061
BC009235-1|AAH09235.1| 763|Homo sapiens hydroxyacyl-Coenzyme A ... 37 0.061
AC011742-2|AAX93141.1| 537|Homo sapiens unknown protein. 37 0.061
AC114733-1|AAY41050.1| 44|Homo sapiens unknown protein. 36 0.11
BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein. 30 9.2
>X96752-1|CAA65528.1| 314|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.026
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQVS 163
S S + +K VTVIGGGLMG+GIAQV+
Sbjct: 19 SASAKKIIVKHVTVIGGGLMGAGIAQVA 46
>BC000306-1|AAH00306.1| 314|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.026
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQVS 163
S S + +K VTVIGGGLMG+GIAQV+
Sbjct: 19 SASAKKIIVKHVTVIGGGLMGAGIAQVA 46
>AF095703-1|AAD13581.1| 314|Homo sapiens short chain
L-3-hydroxyacyl-CoA dehydrogenase precursor protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.026
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQVS 163
S S + +K VTVIGGGLMG+GIAQV+
Sbjct: 19 SASAKKIIVKHVTVIGGGLMGAGIAQVA 46
>AF001903-1|AAB54009.1| 390|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase, isoform 2 protein.
Length = 390
Score = 38.3 bits (85), Expect = 0.026
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQVS 163
S S + +K VTVIGGGLMG+GIAQV+
Sbjct: 78 SASAKKIIVKHVTVIGGGLMGAGIAQVA 105
>AF001902-1|AAB54008.1| 308|Homo sapiens 3-hydroxyacyl-CoA
dehydrogenase protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.026
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQVS 163
S S + +K VTVIGGGLMG+GIAQV+
Sbjct: 13 SASAKKIIVKHVTVIGGGLMGAGIAQVA 40
>U04627-1|AAA56664.1| 763|Homo sapiens 78 kDa gastrin-binding
protein protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.061
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 62 VLTRKFSISTSQNAIKTVTVIGGGLMGSGIAQVSDVDFLKLI 187
VL +K Q +K + ++G GLMG+GIAQVS LK I
Sbjct: 347 VLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTI 388
>D16480-1|BAA03941.1| 763|Homo sapiens enoyl-CoA
hydratase/3-hydroxyacyl-CoA dehydrogenase alpha-subunit
of trifunctio protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.061
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 62 VLTRKFSISTSQNAIKTVTVIGGGLMGSGIAQVSDVDFLKLI 187
VL +K Q +K + ++G GLMG+GIAQVS LK I
Sbjct: 347 VLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTI 388
>BC009235-1|AAH09235.1| 763|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.061
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 62 VLTRKFSISTSQNAIKTVTVIGGGLMGSGIAQVSDVDFLKLI 187
VL +K Q +K + ++G GLMG+GIAQVS LK I
Sbjct: 347 VLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTI 388
>AC011742-2|AAX93141.1| 537|Homo sapiens unknown protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.061
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 62 VLTRKFSISTSQNAIKTVTVIGGGLMGSGIAQVSDVDFLKLI 187
VL +K Q +K + ++G GLMG+GIAQVS LK I
Sbjct: 121 VLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTI 162
>AC114733-1|AAY41050.1| 44|Homo sapiens unknown protein.
Length = 44
Score = 36.3 bits (80), Expect = 0.11
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 80 SISTSQNAIKTVTVIGGGLMGSGIAQ 157
S S + +K VTVIGGGLMG+GIAQ
Sbjct: 19 SASAKKIIVKHVTVIGGGLMGAGIAQ 44
>BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein.
Length = 690
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 47 MNKIFVLTRKFSISTSQNAIKTVTVIGGGLMGSGIAQV 160
+NKI++ RKFS T ++ V + GG +G I Q+
Sbjct: 344 VNKIYLEARKFSFGT---CVRAVVIYGGTQLGHSIRQI 378
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,339,108
Number of Sequences: 237096
Number of extensions: 1342037
Number of successful extensions: 1440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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