Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4634
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 161 4e-40
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 161 4e-40
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 142 2e-34
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 142 2e-34
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 98 4e-21
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 85 3e-17
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 85 3e-17
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 73 1e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 70 9e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 69 1e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 69 1e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 69 2e-12
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 68 5e-12
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 68 5e-12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 68 5e-12
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 67 6e-12
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 62 3e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 60 9e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 59 2e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 59 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 57 6e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 56 1e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 5e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 6e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 6e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 6e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 54 8e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 54 8e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 4e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 4e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 4e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 50 1e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 45 3e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 45 3e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 40 0.001
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.069
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.091
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.21
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 2.6
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 28 4.5
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 28 4.5
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.0
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 6.0
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 6.0
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 6.0
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 6.0
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 6.0
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 27 7.9
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 161 bits (390), Expect = 4e-40
Identities = 75/98 (76%), Positives = 87/98 (88%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 392
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
N +CHACIGGTN+ EDI +L+ G HVV GTPGRV+DMI
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 98 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 223
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ P I R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 161 bits (390), Expect = 4e-40
Identities = 75/98 (76%), Positives = 87/98 (88%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 392
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
N +CHACIGGTN+ EDI +L+ G HVV GTPGRV+DMI
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 159
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 98 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 223
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI P I R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKAR 64
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 142 bits (343), Expect = 2e-34
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 396 AKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
CIGGT+VR+D +LE+G+HVVVGTPGRV DMI
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMI 162
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +2
Query: 92 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 142 bits (343), Expect = 2e-34
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 396 AKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
CIGGT+VR+D +LE+G+HVVVGTPGRV DMI
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMI 162
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +2
Query: 92 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 97.9 bits (233), Expect = 4e-21
Identities = 39/101 (38%), Positives = 70/101 (69%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 383
+A G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 384 DHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
H+ K GGT++R+DI +L VH+V+ TPGR+ D++
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLM 176
Score = 34.7 bits (76), Expect = 0.039
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 110 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
F+D L +LL GI+ G+EKPS IQ+ +I + G
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG 80
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/98 (43%), Positives = 59/98 (60%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 392
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
KC +GG ++ +L HVVV TPGR+ D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/98 (43%), Positives = 59/98 (60%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 392
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
KC +GG ++ +L HVVV TPGR+ D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 392
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
+C +GG + E + +++ TPGR+ +I
Sbjct: 121 GLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 392
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 393 NAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
+C +GG + E + +++ TPGR+ +I
Sbjct: 121 GLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 71.7 bits (168), Expect = 3e-13
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 368
+A GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V
Sbjct: 162 IAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEV 221
Query: 369 VIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
I L K GG + LE GV +VV TPGR+ D +
Sbjct: 222 SIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFL 267
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = +3
Query: 207 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 386
A +G+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 78 ALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS 137
Query: 387 HLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYD 500
+ +GG ++ L H++V TPGR+ D
Sbjct: 138 GIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 104 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
++F ++ + + L G+ KPS IQQ A+ +QG
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG 81
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 70.1 bits (164), Expect = 9e-13
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQ 362
+ RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI+
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
Query: 363 KVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
+ G L K + IGG + + +L GV VV+ TPGR+ D++
Sbjct: 396 EETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVL 443
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 222 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 398
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 399 KCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
K H I G N+ + + +V+GTPG D +
Sbjct: 310 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYL 344
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 222 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 398
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 399 KCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
K H I G N+ + + +V+GTPG D +
Sbjct: 335 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYL 369
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 222 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 398
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 399 KCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
K H I G N+ + + +V+GTPG D +
Sbjct: 719 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYL 753
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQA---LILAPTRELAQQI 359
+A GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 223 VALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Query: 360 QKVVIALGDHLNA------KCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMIT 509
++I + D L + CIGG + E + G+H+VV TPGR+ DM+T
Sbjct: 283 FDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLT 338
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVI 374
+A G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 181 VALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFR 240
Query: 375 ALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYD 500
L + + C GG +++ L SG VVV TPGR+ D
Sbjct: 241 KLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 107 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
+F+ MNL ++L+ G+ P+ IQQ I + G
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG 185
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 392
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 393 NAKCHACIGGTNVREDIPQLESGV-HVVVGTPGRV 494
K GG +++D +L + H+VVGTPGR+
Sbjct: 138 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 172
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 392
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 393 NAKCHACIGGTNVREDIPQLESGV-HVVVGTPGRV 494
K GG +++D +L + H+VVGTPGR+
Sbjct: 138 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 172
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 392
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 393 NAKCHACIGGTNVREDIPQLESGV-HVVVGTPGRV 494
K GG +++D +L + H+VVGTPGR+
Sbjct: 137 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 171
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 67.7 bits (158), Expect = 5e-12
Identities = 33/98 (33%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 396 AKCHACIGGTNVREDIPQL-ESGVHVVVGTPGRVYDMI 506
A+ +GG+ + ++ L ++ +V+GTPGR+ ++
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 67.7 bits (158), Expect = 5e-12
Identities = 33/98 (33%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 396 AKCHACIGGTNVREDIPQL-ESGVHVVVGTPGRVYDMI 506
A+ +GG+ + ++ L ++ +V+GTPGR+ ++
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 67.3 bits (157), Expect = 6e-12
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIAL 380
GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Query: 381 GDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
L K GG + E I L+ G +VV TPGR+ D++
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 353
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 354 QIQKVVIALGDHLNAKCHACIGGT-NVREDIPQLESGVHVVVGTPGRVYDMI 506
QI K N + GG N R+ + +L +G H+++ TPGR+ D+I
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 288
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 353
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 354 QIQKVVIALGDHLNAKCHACIGGT-NVREDIPQLESGVHVVVGTPGRVYDMI 506
QI K N + GG N R+ + +L +G H+++ TPGR+ D+I
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 272
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 61.7 bits (143), Expect = 3e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 353
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 354 QIQKVVIALGDHLNAKCHACIGGT-NVREDIPQLESGVHVVVGTPGRVYDMI 506
QI K N + GG N R+ + +L +G H+++ TPGR+ D+I
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 269
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 60.9 bits (141), Expect = 5e-10
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = +3
Query: 222 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 392
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 393 NAKCHACIGGTNVREDIPQLES-GVHVVVGTPGRVYDMI 506
N GG V ++I ++ V+++V TPGR++ +I
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 60.1 bits (139), Expect = 9e-10
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 383
G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
Query: 384 DHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
H C IGG++V + ++ SG++++V TPGR+
Sbjct: 173 AHHGFSCGLVIGGSDVAFERNRI-SGINIIVCTPGRL 208
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 396 AKCHACIGGTNVREDIPQLESGVHVVVGTP 485
C+G E+ + HV++GTP
Sbjct: 93 VNA-TCLGFDTTAEN----DKISHVLMGTP 117
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 217
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG 33
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +3
Query: 213 KGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIAL 380
+G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L
Sbjct: 104 EGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL 163
Query: 381 GDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYD 500
+ N +GG+N + +L GV ++V TPGR+ D
Sbjct: 164 LEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLD 203
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 57.2 bits (132), Expect = 6e-09
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELA 350
L G+D I +Q+G+GKT F + L ID + + + L+L+PTRELA
Sbjct: 117 LLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
Query: 351 QQIQKVVIALGDHLNAKCHACI-GGTNVREDIPQLESGVHVVVGTPGRVYDM 503
QQI+ V N C+ GG + E + GV +V+ TPGR+ D+
Sbjct: 177 QQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDL 226
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 56.4 bits (130), Expect = 1e-08
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 395
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 396 A---KCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDMI 506
+ +C G N+ + + LE+G +VVGTP RV+D+I
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLI 349
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQ 287
G D + A++G+GKT FS+ I Q
Sbjct: 39 GADALIAAETGSGKTGAFSLPIAQ 62
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.4 bits (125), Expect = 5e-08
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 362
LA + ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIY 180
Query: 363 KVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYDM 503
K+ + L L + N E+ LE HVVV TPG++ M
Sbjct: 181 KLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRM 227
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 104 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 199
+TF D L E +L+ I G+EK + +Q+ I
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVI 120
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQK 365
G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Query: 366 VVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVYD 500
+ + + G ++ + ++ +G +++GT GR+ D
Sbjct: 478 ALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMD 522
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ A+ QG + + K F
Sbjct: 336 GIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAF 395
Query: 269 L 271
L
Sbjct: 396 L 396
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ A+ QG + + K F
Sbjct: 336 GIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAF 395
Query: 269 L 271
L
Sbjct: 396 L 396
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.0 bits (124), Expect = 6e-08
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ A+ QG + + K F
Sbjct: 336 GIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAF 395
Query: 269 L 271
L
Sbjct: 396 L 396
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 53.6 bits (123), Expect = 8e-08
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 356
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG NV + Q+ G ++VGT GRV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 53.6 bits (123), Expect = 8e-08
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 356
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG NV + Q+ G ++VGT GRV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 52.8 bits (121), Expect = 1e-07
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = +3
Query: 207 ASKGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQIQKVV 371
A GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+ +
Sbjct: 299 ALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEA 358
Query: 372 IALGDHLNAKCHACIGGTNVREDIPQLES-GVHVVVGTPGRVYDMI 506
N GG + E +L++ G +VV TPGR+ D++
Sbjct: 359 KKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV 404
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 365
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 366 VVIALGDHLNAKCHACIGG-TNVREDIPQLESGVHVVVGTPGRVYDMI 506
+ AL + +GG V+++ + +VV TPGR++ M+
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 134
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 365
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 366 VVIALGDHLNAKCHACIGG-TNVREDIPQLESGVHVVVGTPGRVYDMI 506
+ AL + +GG V+++ + +VV TPGR++ M+
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ + QG + + K F
Sbjct: 547 GVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAF 606
Query: 269 L 271
L
Sbjct: 607 L 607
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ + QG + + K F
Sbjct: 547 GVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAF 606
Query: 269 L 271
L
Sbjct: 607 L 607
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 204 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 356
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 357 IQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRV 494
I + GG V + Q+E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 89 GDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYF 268
G + +TF + NL E + + + G+ K + IQQ + QG + + K F
Sbjct: 547 GVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAF 606
Query: 269 L 271
L
Sbjct: 607 L 607
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 49.6 bits (113), Expect = 1e-06
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 347
GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 348 AQQIQKVVIALGDHLNAKCHACIGGT-NVREDIPQLESGVHVVVGTPGRVYDMI 506
+ QI GG N ++ I +L G H+++ TPGR+ D++
Sbjct: 263 SLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVM 316
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 365
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 366 VVIALGDHLNAKCHACIGGTNVREDIPQLE--SGVHVVVGTPGRVYDMI 506
L KC GG + ++ L S ++++V T GR+ D +
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = +3
Query: 216 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 365
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 366 VVIALGDHLNAKCHACIGGTNVREDIPQLE--SGVHVVVGTPGRVYDMI 506
L KC GG + ++ L S ++++V T GR+ D +
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 40.7 bits (91), Expect = 6e-04
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 395
RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 396 -AKCHACIGGTNVREDIPQLESG-VHVVVGTPGRVYDMIT 509
AK + G + ++ QL S +V+V TP R+ +T
Sbjct: 217 VAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLT 256
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 318 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIPQLESGVHVVVGTPGRVY 497
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 498 DM 503
M
Sbjct: 159 RM 160
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.069
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +3
Query: 219 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 356
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.091
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 474 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 382
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 225 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 404
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 405 HA-CIGGTNVREDI 443
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 222 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 359
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 164 FEKPSAIQQRAIMPCIQGTRCYRSSPV 244
F + AI++ A+ PC G CYR +P+
Sbjct: 2 FFRRQAIRKCALRPCSGGEACYRDTPL 28
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 225 VIAQAQSGTGKTATFSISILQQIDTSIREC 314
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 114 SKVSTT*SPVRCQVSPGSHSRRSHRNYLDPLRWPIF 7
SK+S + +P+RC S GS HR DP P +
Sbjct: 881 SKISLSSNPLRCDCSGGSQQHLHHRR--DPKAHPFW 914
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 114 SKVSTT*SPVRCQVSPGSHSRRSHRNYLDPLRWPIF 7
SK+S + +P+RC S GS HR DP P +
Sbjct: 881 SKISLSSNPLRCDCSGGSQQHLHHRR--DPKAHPFW 914
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 336 WEPGSKLDIHECLYRFVVESI*RK 265
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 279 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 401
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 279 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 401
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 243 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 422
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAALQAR 1092
Query: 423 TNVREDIPQ--LESGVHVVVGTP 485
+ ++ P S H V +P
Sbjct: 1093 SIEQQQSPMHVRSSSSHSQVSSP 1115
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 243 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 422
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAALQAR 1092
Query: 423 TNVREDIPQ--LESGVHVVVGTP 485
+ ++ P S H V +P
Sbjct: 1093 SIEQQQSPMHVRSSSSHSQVSSP 1115
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 279 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 401
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 164 FEKPSAIQQRAIMPCIQGTRCYRSSPV 244
F + A+++ PCIQ CY+++P+
Sbjct: 38 FIRRQAVRKTPFKPCIQQESCYQAAPL 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,690,221
Number of Sequences: 27780
Number of extensions: 310849
Number of successful extensions: 991
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -