BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4633
(499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 240 2e-65
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 231 1e-62
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 231 1e-62
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 26 0.82
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 1.9
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 1.9
DQ370048-1|ABD18609.1| 144|Anopheles gambiae putative secreted ... 23 4.4
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 4.4
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 4.4
AF457555-1|AAL68785.1| 161|Anopheles gambiae salivary gland 1-l... 23 4.4
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 7.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.6
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 7.6
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 23 7.6
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 240 bits (587), Expect = 2e-65
Identities = 108/140 (77%), Positives = 123/140 (87%)
Frame = +3
Query: 75 GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 254
GATSLCFVYPLDFARTRL ADVG+G G+REF+GL +C+ K KSDG+IGLYRGF VSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
Query: 255 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYSFDTVRRRMMMQSG 434
IIIYRA+YFG +DTA+GMLPDPKNT I +SWAIAQ VTT +GIISY FDTVRRRMMMQSG
Sbjct: 186 IIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSG 245
Query: 435 RAKSDILYKNTIHCWATIAK 494
RAKS+++YKNT+ CW I K
Sbjct: 246 RAKSEVMYKNTLDCWVKIGK 265
Score = 23.8 bits (49), Expect = 3.3
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Frame = +3
Query: 159 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTP 332
+++ G+ +C +I K G+ +RG +V +A F F D + + KNT
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQ 110
Query: 333 IVISWAIAQTVTTVAGIIS----YSFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 497
+ AG S Y D R R+ GR + + + C K+
Sbjct: 111 FWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKS 169
Score = 23.0 bits (47), Expect = 5.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 17 RKTQFWRYF 43
+ TQFWRYF
Sbjct: 107 KNTQFWRYF 115
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 231 bits (565), Expect = 1e-62
Identities = 105/140 (75%), Positives = 119/140 (85%)
Frame = +3
Query: 75 GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 254
GATSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+IGLYRGF VSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
Query: 255 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYSFDTVRRRMMMQSG 434
IIIYRA+YFG +DTA+GMLPDPKNT I +SWAIAQ VTT +GIISY FDTVRRRMMMQS
Sbjct: 186 IIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSW 245
Query: 435 RAKSDILYKNTIHCWATIAK 494
KS+++YKNT+ CW I K
Sbjct: 246 PCKSEVMYKNTLDCWVKIGK 265
Score = 23.4 bits (48), Expect = 4.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 159 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 293
+++ G+ +C +I K G+ +RG +V +A F F D
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKD 95
Score = 23.0 bits (47), Expect = 5.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 17 RKTQFWRYF 43
+ TQFWRYF
Sbjct: 107 KNTQFWRYF 115
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 231 bits (565), Expect = 1e-62
Identities = 105/140 (75%), Positives = 119/140 (85%)
Frame = +3
Query: 75 GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 254
GATSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+IGLYRGF VSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
Query: 255 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYSFDTVRRRMMMQSG 434
IIIYRA+YFG +DTA+GMLPDPKNT I +SWAIAQ VTT +GIISY FDTVRRRMMMQS
Sbjct: 186 IIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSW 245
Query: 435 RAKSDILYKNTIHCWATIAK 494
KS+++YKNT+ CW I K
Sbjct: 246 PCKSEVMYKNTLDCWVKIGK 265
Score = 23.4 bits (48), Expect = 4.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 159 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 293
+++ G+ +C +I K G+ +RG +V +A F F D
Sbjct: 51 KQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKD 95
Score = 23.0 bits (47), Expect = 5.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 17 RKTQFWRYF 43
+ TQFWRYF
Sbjct: 107 KNTQFWRYF 115
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.8 bits (54), Expect = 0.82
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 404 CVEGIGDDTGDCGYGLSDGPADYNGCVLRVGQH 306
C+ G+ + GD GY +GP G GQ+
Sbjct: 284 CLPGMSGEKGDKGYTGPEGPPGEPGAASEKGQN 316
Score = 23.0 bits (47), Expect = 5.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 440 GTTRLHHHAPTDCVEGIGDDTGDCGYGLSDGPADYNGCVLRVGQ 309
GTT L CV+G+ G G DG + G R+G+
Sbjct: 391 GTTGLPGIPGPPCVDGLPGAAGPVGPRGYDGEKGFKGEPGRIGE 434
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 24.6 bits (51), Expect = 1.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 326 HTHCNQLGHRSDRNHSRRYHLLFL 397
HTHC L S R R LL+L
Sbjct: 61 HTHCTGLSRDSTRELGRNNQLLWL 84
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 434 TRLHHHAPTDCVEGIGDDTGDCGYGLSDGPADYNGCVLRV 315
T LH + C+ + G C Y +G DY +L V
Sbjct: 588 TGLHETSGYTCISDETEAPGSCFYITKEGTIDYEVVLLAV 627
>DQ370048-1|ABD18609.1| 144|Anopheles gambiae putative secreted
polypeptide protein.
Length = 144
Score = 23.4 bits (48), Expect = 4.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 212 SDRSVQRFRCVRARYHHLPCLILRFLRHCP 301
SD VQRF ++ ++H C L + P
Sbjct: 90 SDSVVQRFVAIKVQFHGARCTQCSLLSYDP 119
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.4 bits (48), Expect = 4.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 94 SCTPLTSHVPVLPP 135
SC L H+P LPP
Sbjct: 376 SCNSLGDHIPPLPP 389
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
protein.
Length = 1344
Score = 23.4 bits (48), Expect = 4.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 121 VRAKSRGYTKHREVAPGGTTGGQI 50
+RA RG HR V GG T Q+
Sbjct: 1251 IRAGPRGQPGHRAVNIGGKTAVQV 1274
>AF457555-1|AAL68785.1| 161|Anopheles gambiae salivary gland 1-like
4 protein protein.
Length = 161
Score = 23.4 bits (48), Expect = 4.4
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 218 RSVQRFRCVRARY-HHLPCLILRFLRHCPRHAAR 316
R++ +++ + A+ HLP I++F+ PRH R
Sbjct: 31 RALHQYQLLAAQGDRHLPQQIVKFVYAAPRHENR 64
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 22.6 bits (46), Expect = 7.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 262 MMIPCTDTPKPLYRPIRPSDLKILLMQFPRPENSRWPSPLPTSAARRVRAKSRGYTK 92
++I C D P I +L + L FP S W P+ R + + RG T+
Sbjct: 497 VLINCKDVLAPHLAKI--FNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGITQ 551
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 22.6 bits (46), Expect = 7.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 262 MMIPCTDTPKPLYRPIRPSDLKILLMQFPRPENSRWPSPL 143
+MIP D P P PIR +K +++ W PL
Sbjct: 429 LMIPIIDIPAPFGIPIR-KIIKYKNVEYNNELGLGWSFPL 467
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 22.6 bits (46), Expect = 7.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 272 LILRFLRHCPRHAARP*EHTHCNQLGHRSDRNHS 373
LI F P HA++P N + HR+ RN +
Sbjct: 181 LIAIFTTVQPMHASQPLRGETGNWVQHRAQRNRT 214
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical
protein protein.
Length = 278
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 77 SRRHHRRPDYQRSNARTASSSLVP 6
S R H+R Y S + AS+ L+P
Sbjct: 27 SNRTHQRHVYGTSKTKNASAPLLP 50
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,104
Number of Sequences: 2352
Number of extensions: 12162
Number of successful extensions: 43
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -