Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4633
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   266   7e-74
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   266   7e-74
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   4.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  266 bits (653), Expect = 7e-74
 Identities = 120/141 (85%), Positives = 132/141 (93%)
 Frame = +3

Query: 75  GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 254
           GATSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185

Query: 255 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYSFDTVRRRMMMQSG 434
           IIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SY FDTVRRRMMMQSG
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSG 245

Query: 435 RAKSDILYKNTIHCWATIAKT 497
           RAKS+ILYK+T+HCWATI KT
Sbjct: 246 RAKSEILYKSTLHCWATIYKT 266



 Score = 27.5 bits (58), Expect = 0.082
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 99  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 233
           YP D  R R+    G+   +  +    +C + I+K++G    ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 26.6 bits (56), Expect = 0.14
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
 Frame = +3

Query: 156 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 329
           ++ + G+ +C  +I K  G +  +RG   +V      +A  F F D  + +      KNT
Sbjct: 50  EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109

Query: 330 PIVISWAIAQTVTTVAGIIS----YSFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAK 494
             +  +         AG  S    Y  D  R R+    G+A  +  +    +C   I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFK 168


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  266 bits (653), Expect = 7e-74
 Identities = 120/141 (85%), Positives = 132/141 (93%)
 Frame = +3

Query: 75  GATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 254
           GATSLCFVYPLDFARTRLAADVGK  G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQG
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185

Query: 255 IIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYSFDTVRRRMMMQSG 434
           IIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SY FDTVRRRMMMQSG
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSG 245

Query: 435 RAKSDILYKNTIHCWATIAKT 497
           RAKS+ILYK+T+HCWATI KT
Sbjct: 246 RAKSEILYKSTLHCWATIYKT 266



 Score = 27.5 bits (58), Expect = 0.082
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +3

Query: 99  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 233
           YP D  R R+    G+   +  +    +C + I+K++G    ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 26.6 bits (56), Expect = 0.14
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
 Frame = +3

Query: 156 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 329
           ++ + G+ +C  +I K  G +  +RG   +V      +A  F F D  + +      KNT
Sbjct: 50  EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109

Query: 330 PIVISWAIAQTVTTVAGIIS----YSFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAK 494
             +  +         AG  S    Y  D  R R+    G+A  +  +    +C   I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFK 168


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 170 GEFTLAISLTDIGGKTGTCEVKGV 99
           G++ +  +    GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 170 GEFTLAISLTDIGGKTGTCEVKGV 99
           G++ +  +    GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 335 CNQLGHRSDRNHSRRYHLLFLRHSP*AHDDAVWSCQ 442
           CN + + +++ + R    +F + +   HD  VW+ Q
Sbjct: 154 CNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNHQ 189


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 381 IISYSFDTVRRRMMMQSGRAKSDILYKNTI 470
           I   + DT+ R+ ++   + K D LY N +
Sbjct: 283 IFDLTTDTLIRKYIIPKEQVKEDSLYTNIV 312


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 125 SCRRCR*GRWPA*ILRSRKLHQQDLQVRRSDRSVQRFRCVRAR 253
           SC R R   +     R  KLH +  ++     S +R+ C R R
Sbjct: 236 SCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSRER 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,266
Number of Sequences: 438
Number of extensions: 3146
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)