Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4629
         (313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.18 
AK128388-1|BAC87414.1|  146|Homo sapiens protein ( Homo sapiens ...    28   5.0  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +1

Query: 250 KQKKKKNSRGGPVPNS 297
           K+KKKKNSRGGPVP +
Sbjct: 45  KKKKKKNSRGGPVPGN 60


>AK128388-1|BAC87414.1|  146|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46531 fis, clone THYMU3036310. ).
          Length = 146

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 267 FFFFLFCIYKRLECTG 220
           FFFF F +  RLEC+G
Sbjct: 10  FFFFFFTLLSRLECSG 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,549,703
Number of Sequences: 237096
Number of extensions: 662110
Number of successful extensions: 803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)