Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4620
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 53 3e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 53 3e-07
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 53 3e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 42 0.001
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 42 0.001
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 41 0.002
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 41 0.002
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 39 0.005
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 37 0.020
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 37 0.027
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 37 0.027
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 35 0.082
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 35 0.082
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 35 0.082
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 35 0.082
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 35 0.082
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 35 0.11
AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p pro... 29 4.1
AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl... 29 4.1
AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-P... 29 4.1
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 5.4
DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated po... 28 9.4
DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated po... 28 9.4
BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p pro... 28 9.4
AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA... 28 9.4
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
+++KW+I INP K+ A+ F + + PI W ++YLG+
Sbjct: 725 YYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIF 777
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
D +TF+ HI + + I+ LYP+I ++S
Sbjct: 778 DKKLTFKYHINNTIMKVNKIICTLYPLINRKS 809
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
+++KW+I INP K+ A+ F + + PI W ++YLG+
Sbjct: 673 YYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIF 725
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
D +TF+ HI + + I+ LYP+I ++S
Sbjct: 726 DKKLTFKYHINNTIMKVNKIICTLYPLINRKS 757
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/98 (30%), Positives = 43/98 (43%)
Frame = -1
Query: 307 ALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVK 128
A +W R+W I IN +KS V F PP+ + P+P K
Sbjct: 698 AYRFSEWARRWNIGINSSKSNNVCFTLKR-----------RTPPPVYIEEVPVPQPNAAK 746
Query: 127 YLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
YLGV LD +TF H+ +R R + + Y ++ RS
Sbjct: 747 YLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRS 784
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W WRI +N K V F PP+ L P+P A +V YLGV
Sbjct: 696 KWLSDWRIKVNEQKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVH 744
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMI 26
LD +T+R HI++ + + L+ +I
Sbjct: 745 LDRRLTWRRHIEAKKTQLKLKANNLHWLI 773
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = -1
Query: 298 LGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLG 119
L W ++W + +NP K+ F +T PI L + + KYLG
Sbjct: 705 LAAWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEGVILDQPSQAKYLG 755
Query: 118 VTLDASMTFRPHIKSVRDR 62
+TLD +TF PH+K+ R
Sbjct: 756 ITLDKRLTFGPHLKATTRR 774
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/93 (32%), Positives = 39/93 (41%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W WRI IN K V F PP+ L IP A +V YLGV
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVH 742
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
LD +T+R HI++ L+ +I RS
Sbjct: 743 LDRRLTWRKHIEAKSKHLKLKARNLHWLINARS 775
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/93 (32%), Positives = 39/93 (41%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W WRI IN K V F PP+ L IP A +V YLGV
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVH 742
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
LD +T+R HI++ L+ +I RS
Sbjct: 743 LDRRLTWRKHIEAKSKHLKLKARNLHWLINARS 775
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 178 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 38
P + + +P+ R +YLG+T+ M F HI S+R R ++G L
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGAL 765
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 37.1 bits (82), Expect = 0.020
Identities = 27/96 (28%), Positives = 43/96 (44%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 316 RWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLM 367
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
LD +TF H+ ++ + +L +I K S +P
Sbjct: 368 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLP 403
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 27/96 (28%), Positives = 43/96 (44%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLM 814
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
LD +TF H+ ++ + +L +I K S +P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLP 850
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 27/96 (28%), Positives = 43/96 (44%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLM 814
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
LD +TF H+ ++ + +L +I K S +P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLP 850
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 27/96 (28%), Positives = 43/96 (44%)
Frame = -1
Query: 292 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVT 113
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLM 814
Query: 112 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
LD +TF H+ ++ + +L +I K S +P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLP 850
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 36.7 bits (81), Expect = 0.027
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = -1
Query: 301 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYL 122
A QW W + IN K V F P ++L + I + KYL
Sbjct: 705 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 753
Query: 121 GVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
G+TLD +TF HI +++ + R+ +I R+
Sbjct: 754 GITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 789
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 36.7 bits (81), Expect = 0.027
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = -1
Query: 301 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYL 122
A QW W + IN K V F P ++L + I + KYL
Sbjct: 507 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 555
Query: 121 GVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 14
G+TLD +TF HI +++ + R+ +I R+
Sbjct: 556 GITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 591
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 637 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 688
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T PH+ V + ++ ++ +RS +P
Sbjct: 689 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLP 723
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T PH+ V + ++ ++ +RS +P
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLP 839
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T PH+ V + ++ ++ +RS +P
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLP 839
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 715 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 766
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T PH+ V + ++ ++ +RS +P
Sbjct: 767 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLP 801
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T PH+ V + ++ ++ +RS +P
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLP 839
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 34.7 bits (76), Expect = 0.11
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = -1
Query: 289 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXRNLTPPITLFRQPIPWARKVKYLGVTL 110
W KW I +N AK+ V+F + + Q I K YLGVTL
Sbjct: 765 WADKWGISVNAAKTGHVIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTL 816
Query: 109 DASMTFRPHIKSVRDRAAFILGRLYPMICKRSLVP 5
D+ +T H+ + + + +L ++ RS +P
Sbjct: 817 DSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLP 851
>AY058580-1|AAL13809.1| 453|Drosophila melanogaster LD27389p
protein.
Length = 453
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 242 RSTFRWVDVYAPFSEPLS*G*GWEIE 319
R +RWVD Y PF++P WE+E
Sbjct: 256 RIKYRWVDTYFPFTQP-----SWELE 276
>AF012089-2|AAB65750.2| 452|Drosophila melanogaster phenylalanyl
tRNA synthetase protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 242 RSTFRWVDVYAPFSEPLS*G*GWEIE 319
R +RWVD Y PF++P WE+E
Sbjct: 255 RIKYRWVDTYFPFTQP-----SWELE 275
>AE013599-1806|AAF58310.1| 453|Drosophila melanogaster CG13348-PA
protein.
Length = 453
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 242 RSTFRWVDVYAPFSEPLS*G*GWEIE 319
R +RWVD Y PF++P WE+E
Sbjct: 256 RIKYRWVDTYFPFTQP-----SWELE 276
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1
Query: 142 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 26
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1450
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 511 SPALARASVSKFSQVEPVSSPTRPAV 588
SP L+ S SK S PVSSP+ P +
Sbjct: 567 SPQLSSKSASKSSPCTPVSSPSEPNI 592
>DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1072
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 511 SPALARASVSKFSQVEPVSSPTRPAV 588
SP L+ S SK S PVSSP+ P +
Sbjct: 567 SPQLSSKSASKSSPCTPVSSPSEPNI 592
>BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p
protein.
Length = 828
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 45 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 155
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
>AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA
protein.
Length = 943
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 45 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 155
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,590,557
Number of Sequences: 53049
Number of extensions: 698659
Number of successful extensions: 2025
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2015
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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