Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4619
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016153-1|AAH16153.1|  275|Homo sapiens TMEM45B protein protein.      30   9.6  
AK098106-1|BAC05235.1|  275|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>BC016153-1|AAH16153.1|  275|Homo sapiens TMEM45B protein protein.
          Length = 275

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -1

Query: 240 HIYSHKNYLYVETIFQHVSVYLFFA-HPMVSGIQVLI-HTFRGTTSTHITATVLHYEFFI 67
           H+Y H+N+      +QH ++YLFFA   +V  +  L+ H   G     +   V    F  
Sbjct: 74  HLY-HENHWIKLMNWQHSTMYLFFAVSGIVDMLTYLVSHVPLGVDRLVMAVAVFMEGFLF 132

Query: 66  YHTIQNR 46
           Y+ + NR
Sbjct: 133 YYHVHNR 139


>AK098106-1|BAC05235.1|  275|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40787 fis, clone TRACH2006866. ).
          Length = 275

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -1

Query: 240 HIYSHKNYLYVETIFQHVSVYLFFA-HPMVSGIQVLI-HTFRGTTSTHITATVLHYEFFI 67
           H+Y H+N+      +QH ++YLFFA   +V  +  L+ H   G     +   V    F  
Sbjct: 74  HLY-HENHWIKLMNWQHSTMYLFFAVSGIVDMLTYLVSHVPLGVDRLVMAVAVFMEGFLF 132

Query: 66  YHTIQNR 46
           Y+ + NR
Sbjct: 133 YYHVHNR 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,548,648
Number of Sequences: 237096
Number of extensions: 1805823
Number of successful extensions: 3266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3266
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)