Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4619
         (723 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81038-16|CAN99683.1|  400|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z81038-15|CAB02769.1|  404|Caenorhabditis elegans Hypothetical p...    28   7.8  

>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
            protein C48E7.6 protein.
          Length = 1764

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 145  NTTYHWM-GEEEVYGDMLKDCFNVQVIFMTINM*CFQKKFKFI 270
            N T++W+ GE+E      KD    +V++  +NM  F  KF F+
Sbjct: 1426 NGTFYWVAGEKEAKEFSQKDIDEGRVLYAQLNMHSFHDKFDFV 1468


>AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical
           protein C08F1.11 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 271 YLTLILI*HNFYIQIILGTFRRFKFCFRHY 360
           Y+TL L+ +NFY  + LGT   F F    Y
Sbjct: 18  YVTLSLLIYNFYFNLALGTINCFHFIKASY 47


>Z81038-16|CAN99683.1|  400|Caenorhabditis elegans Hypothetical
           protein C25A1.9b protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 386 TITRLMKVCDGNVRYRKNLLPYNPV 460
           TITRLMK+   + +  K+LLP+N V
Sbjct: 85  TITRLMKILKTSPQSIKDLLPHNTV 109


>Z81038-15|CAB02769.1|  404|Caenorhabditis elegans Hypothetical
           protein C25A1.9a protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 386 TITRLMKVCDGNVRYRKNLLPYNPV 460
           TITRLMK+   + +  K+LLP+N V
Sbjct: 85  TITRLMKILKTSPQSIKDLLPHNTV 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,092,123
Number of Sequences: 27780
Number of extensions: 311125
Number of successful extensions: 638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)