Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4617
         (532 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1522 - 37962431-37963060,37963216-37963542                       27   7.1  
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64...    27   9.4  

>01_06_1522 - 37962431-37963060,37963216-37963542
          Length = 318

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 477 IALMCGRAHSPPGVKWLLEPID 412
           + L+ G+ H PPG +WL E +D
Sbjct: 41  LTLLVGQLHLPPGGRWLDEYMD 62


>06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-648352,
            649088-649798,649944-650674,650942-651017,651096-651182,
            651429-651517,651917-651973,652402-652510,652590-652649,
            652835-652919,653178-653242,653694-653753,653869-653913,
            654697-654800,654877-655099
          Length = 1156

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 184  RYIPRCQCNKIDDCLYICNLHYNCTVRELIIGNAYIYRS 68
            RY+  C+C   D  LY  N    C   ++  G + IY S
Sbjct: 901  RYLSSCRCGSYDHHLYALNYKDRCCTYKISCGGS-IYGS 938


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,117,497
Number of Sequences: 37544
Number of extensions: 311771
Number of successful extensions: 673
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)