Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4614
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 58 1e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 58 1e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 58 1e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 58 1e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 58 2e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 58 2e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 56 5e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 53 5e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 8e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 48 1e-05
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 46 5e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 46 5e-05
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 44 2e-04
BT003191-1|AAO24946.1| 893|Drosophila melanogaster RE59670p pro... 29 6.7
AF059613-1|AAC25708.1| 893|Drosophila melanogaster transportin ... 29 6.7
AE014296-1099|AAN12090.1| 893|Drosophila melanogaster CG7398-PC... 29 6.7
AE014296-1098|AAN12089.1| 893|Drosophila melanogaster CG7398-PB... 29 6.7
AE014296-1097|AAF50674.1| 893|Drosophila melanogaster CG7398-PA... 29 6.7
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 58.4 bits (135), Expect = 1e-08
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSI-TNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
YADD + +++ +L + +N + L++ WSK + + IN KT I+ +
Sbjct: 287 YADDTIILSRSKYTKLAI---NLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
+ +T PP+ I+G + +K R LG+ +DR +++ A + K AA L L
Sbjct: 344 I-YT--PPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKN 399
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDL-TEAQLNKLERLQNFCLRFIFGLRKYDHVS 150
+ LP K L + ++ PI YA + L ++ Q K++ ++N +R I +Y +
Sbjct: 400 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 459
Query: 149 EFRAK 135
+ R K
Sbjct: 460 DIRTK 464
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSI-TNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
YADD + +++ +L + +N + L++ WSK + + IN KT I+ +
Sbjct: 734 YADDTIILSRSKYTKLAI---NLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
+ +T PP+ I+G + +K R LG+ +DR +++ A + K AA L L
Sbjct: 791 I-YT--PPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKN 846
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDL-TEAQLNKLERLQNFCLRFIFGLRKYDHVS 150
+ LP K L + ++ PI YA + L ++ Q K++ ++N +R I +Y +
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 149 EFRAK 135
+ R K
Sbjct: 907 DIRTK 911
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSI-TNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
YADD + +++ +L + +N + L++ WSK + + IN KT I+ +
Sbjct: 734 YADDTIILSRSKYTKLAI---NLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
+ +T PP+ I+G + +K R LG+ +DR +++ A + K AA L L
Sbjct: 791 I-YT--PPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKN 846
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDL-TEAQLNKLERLQNFCLRFIFGLRKYDHVS 150
+ LP K L + ++ PI YA + L ++ Q K++ ++N +R I +Y +
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 149 EFRAK 135
+ R K
Sbjct: 907 DIRTK 911
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSI-TNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
YADD + +++ +L + +N + L++ WSK + + IN KT I+ +
Sbjct: 734 YADDTIILSRSKYTKLAI---NLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
+ +T PP+ I+G + +K R LG+ +DR +++ A + K AA L L
Sbjct: 791 I-YT--PPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKN 846
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDL-TEAQLNKLERLQNFCLRFIFGLRKYDHVS 150
+ LP K L + ++ PI YA + L ++ Q K++ ++N +R I +Y +
Sbjct: 847 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQA 906
Query: 149 EFRAK 135
+ R K
Sbjct: 907 DIRTK 911
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 57.6 bits (133), Expect = 2e-08
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKV-NNDLLSITNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
+ADD + +++ + P+ T + + L S+ W + + IN K + + T
Sbjct: 665 FADDTAILSRS---KCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF-------T 714
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
++ PP+ ++ + IP +D+V LG+ +DR ++W I+ + + A +L L R
Sbjct: 715 LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINAR 774
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDLTEAQLNKLERLQNFCLRFIFGLRKY 162
+ L K L S+L PI Y + + + + ++ ++R Q+ LR I G Y
Sbjct: 775 SPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 57.6 bits (133), Expect = 2e-08
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKV-NNDLLSITNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
+ADD + +++ + P+ T + + L S+ W + + IN K + + T
Sbjct: 665 FADDTAILSRS---KCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF-------T 714
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRL---R 327
++ PP+ ++ + IP +D+V LG+ +DR ++W I+ + + A +L L R
Sbjct: 715 LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINAR 774
Query: 326 NFLPTATKTALAQSLLLPILDYADVSYLDLTEAQLNKLERLQNFCLRFIFGLRKY 162
+ L K L S+L PI Y + + + + ++ ++R Q+ LR I G Y
Sbjct: 775 SPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 56.0 bits (129), Expect = 5e-08
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Frame = -3
Query: 731 LFAIYINSVSNHLISSYHLYADDLQLYTQAPVEELPLACT-KVNNDLLSITNWSKSYGLQ 555
L+ IY + + + +ADD + +++ P+ T ++ L+ I W + ++
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRS---RSPIQATAQLALYLIDIKKWLSDWRIK 704
Query: 554 INPTKTQVIIVGAPRRLATVDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKE 375
+N K + + T++ PP+ ++ + +P +D+V LG+ +DR ++W I+
Sbjct: 705 VNEQKCKHVTF-------TLNRQDCPPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEA 757
Query: 374 TCRKIYAAAGSLRRLRNF---LPTATKTALAQSLLLPILDYADVSYLDLTEAQLNKLERL 204
++ A +L L N L K L S+L PI Y + + + + ++ ++R
Sbjct: 758 KKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRA 817
Query: 203 QNFCLRFIFGLRKY 162
Q+ LR I G Y
Sbjct: 818 QSKILRTITGAPWY 831
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 52.8 bits (121), Expect = 5e-07
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Frame = -3
Query: 674 YADDLQL-YTQAPVEELPLACTKVNNDLLSITNWSKSYGLQINPTKTQVIIVGAPRRLAT 498
YADD+ L Y+ E A + L ++ W K + L++NP KT + L T
Sbjct: 678 YADDIALLYSSNCCNE---AARGLQEYLTTLAAWCKRWILKVNPQKT----INPCFTLKT 730
Query: 497 VDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIYAAAGSLRRLRNFL 318
+ P I ++GV + + + LGI +D+ +++ +K T R+ Y LR L N
Sbjct: 731 LSPVTAP-IELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRK 789
Query: 317 PTAT---KTALAQSLLLPILDYADVSYLDLTEAQLNKLERLQNFCLRFI 180
T T K A+ + PI Y + ++ N+++ LQN +R I
Sbjct: 790 STMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAI 838
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 48.8 bits (111), Expect = 8e-06
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 11/255 (4%)
Frame = -3
Query: 734 MLFAIYINSVSN----HLISSYHLYADDLQLYTQAPVEELPLACTKVNNDLL--SITNWS 573
+LF I N +SN H ++ YADD L T N D L I NW
Sbjct: 642 ILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKN----TNTNFNLDNLFDDIENWC 697
Query: 572 KSYGLQINPTKTQVIIVGAPRRLATVDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSW 393
G ++ +K Q + + R IS + QIP ++ LGI ++ W
Sbjct: 698 SYSGASLSLSKCQHLHICRKRHCTC-------KISCNNFQIPSVTSLKILGITLNNKYKW 750
Query: 392 DAQIKETCRKIYAAAGSLRRLRNF---LPTATKTALAQSLLLPILDYADVSYLDLTEAQL 222
+ I K++ ++ L + T T +A++ ++ L+Y Y ++ L
Sbjct: 751 NTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSIL 810
Query: 221 NKLERLQNFCLRFIFGLRKYDHVSEFRAKLKWLPIRLRRNAHILSLLYTVLFNPSSP--S 48
NK++ N +R G + ++ + P+ ++R+ I L ++ + ++P
Sbjct: 811 NKIKTPFNSAIRLALGAYRSTPINNLLYESNTPPLEMKRDLQIAKLSQNLILSKNTPIHK 870
Query: 47 YLKRRFEFIRDTHTI 3
+LK + + T TI
Sbjct: 871 FLKPKKANKKKTSTI 885
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 48.0 bits (109), Expect = 1e-05
Identities = 32/129 (24%), Positives = 65/129 (50%)
Frame = -3
Query: 716 INSVSNHLISSYHLYADDLQLYTQAPVEELPLACTKVNNDLLSITNWSKSYGLQINPTKT 537
I S+S H +ADD+ + A + +P N + + W + GL+I KT
Sbjct: 631 ILSISKPRGVELHCFADDVAI--TAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKT 688
Query: 536 QVIIVGAPRRLATVDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWDAQIKETCRKIY 357
+V+++ + + +V+ R+ + GV+I ++ ++ LG+ +DR +S+ A + +K
Sbjct: 689 EVVLLSSRK---SVECMRV---EVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAA 742
Query: 356 AAAGSLRRL 330
A +L R+
Sbjct: 743 MTAAALARI 751
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 46.0 bits (104), Expect = 5e-05
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSITNWSKSYGLQINPTKTQVIIVGAPRRLATV 495
YADD + T++ + + A + + L + W++++ ++IN K + R +
Sbjct: 679 YADDTAVLTKS--KSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA--NRTGSC 734
Query: 494 DWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWD---AQIKETCRKIYAAAGSLRRLRN 324
P +S++G I + LGI +DR +++ I++ R A L RN
Sbjct: 735 -----PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 789
Query: 323 FLPTATKTALAQSLLLPILDYADVSYLDLTEAQLNKLERLQNFCLRFIFGLRKYDHVSEF 144
L K + +S+L P L Y Y ++ LNK+ LQ LR I G Y +
Sbjct: 790 KLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDI 849
Query: 143 RAKLK 129
LK
Sbjct: 850 ERDLK 854
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 46.0 bits (104), Expect = 5e-05
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = -3
Query: 674 YADDLQLYTQAPVEELPLACTKVNNDLLSITNWSKSYGLQINPTKTQVIIVGAPRRLATV 495
YADD + T++ + + A + + L + W++++ ++IN K + R +
Sbjct: 481 YADDTAVLTKS--KSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA--NRTGSC 536
Query: 494 DWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWD---AQIKETCRKIYAAAGSLRRLRN 324
P +S++G I + LGI +DR +++ I++ R A L RN
Sbjct: 537 -----PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 591
Query: 323 FLPTATKTALAQSLLLPILDYADVSYLDLTEAQLNKLERLQNFCLRFIFGLRKYDHVSEF 144
L K + +S+L P L Y Y ++ LNK+ LQ LR I G Y +
Sbjct: 592 KLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDI 651
Query: 143 RAKLK 129
LK
Sbjct: 652 ERDLK 656
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 44.0 bits (99), Expect = 2e-04
Identities = 41/221 (18%), Positives = 92/221 (41%), Gaps = 8/221 (3%)
Frame = -3
Query: 734 MLFAIYINSVSNHLISSYH-----LYADDLQLYTQAPVEELPLACTKVNNDLLSITNWSK 570
+L+ +Y + + +S Y +ADD+ + ++ E A + + + W++
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHD--AADGIQDFAYRFSEWAR 706
Query: 569 SYGLQINPTKTQVIIVGAPRRLATVDWTRIPPISIDGVQIPVSDKVRNLGIFVDRHMSWD 390
+ + IN +K+ + RR PP+ I+ V +P + + LG+ +DR +++
Sbjct: 707 RWNIGINSSKSNNVCFTLKRRTP-------PPVYIEEVPVPQPNAAKYLGVLLDRRLTFS 759
Query: 389 AQIKETCRKIYAAAGS---LRRLRNFLPTATKTALAQSLLLPILDYADVSYLDLTEAQLN 219
+ + ++ A L R+ L + K + + +L P Y + ++ +
Sbjct: 760 KHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIK 819
Query: 218 KLERLQNFCLRFIFGLRKYDHVSEFRAKLKWLPIRLRRNAH 96
+++ +QN R I G + + LK + N H
Sbjct: 820 RIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKH 860
>BT003191-1|AAO24946.1| 893|Drosophila melanogaster RE59670p
protein.
Length = 893
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 SWWQ*GENFADVLRILQPHKSFDKFL*FVHPMTYAYLQRYPSFSPYH*LVFELHQLKLGE 481
+W GE ++ IL+ +S D M RYP F+ Y L++ L +LK +
Sbjct: 2 TWEPQGEGLQQIIAILKESQSPDTATKMAVQMKLEEFNRYPDFNNY--LIYVLTKLKTED 59
Query: 482 FASNQLS 502
+ LS
Sbjct: 60 EPTRSLS 66
>AF059613-1|AAC25708.1| 893|Drosophila melanogaster transportin
protein.
Length = 893
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 SWWQ*GENFADVLRILQPHKSFDKFL*FVHPMTYAYLQRYPSFSPYH*LVFELHQLKLGE 481
+W GE ++ IL+ +S D M RYP F+ Y L++ L +LK +
Sbjct: 2 TWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY--LIYVLTKLKTED 59
Query: 482 FASNQLS 502
+ LS
Sbjct: 60 EPTRSLS 66
>AE014296-1099|AAN12090.1| 893|Drosophila melanogaster CG7398-PC,
isoform C protein.
Length = 893
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 SWWQ*GENFADVLRILQPHKSFDKFL*FVHPMTYAYLQRYPSFSPYH*LVFELHQLKLGE 481
+W GE ++ IL+ +S D M RYP F+ Y L++ L +LK +
Sbjct: 2 TWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY--LIYVLTKLKTED 59
Query: 482 FASNQLS 502
+ LS
Sbjct: 60 EPTRSLS 66
>AE014296-1098|AAN12089.1| 893|Drosophila melanogaster CG7398-PB,
isoform B protein.
Length = 893
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 SWWQ*GENFADVLRILQPHKSFDKFL*FVHPMTYAYLQRYPSFSPYH*LVFELHQLKLGE 481
+W GE ++ IL+ +S D M RYP F+ Y L++ L +LK +
Sbjct: 2 TWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY--LIYVLTKLKTED 59
Query: 482 FASNQLS 502
+ LS
Sbjct: 60 EPTRSLS 66
>AE014296-1097|AAF50674.1| 893|Drosophila melanogaster CG7398-PA,
isoform A protein.
Length = 893
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 SWWQ*GENFADVLRILQPHKSFDKFL*FVHPMTYAYLQRYPSFSPYH*LVFELHQLKLGE 481
+W GE ++ IL+ +S D M RYP F+ Y L++ L +LK +
Sbjct: 2 TWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY--LIYVLTKLKTED 59
Query: 482 FASNQLS 502
+ LS
Sbjct: 60 EPTRSLS 66
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,274,992
Number of Sequences: 53049
Number of extensions: 700650
Number of successful extensions: 1663
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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