Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4613
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin prot...    31   4.1  
AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form be...    31   4.1  
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro...    31   4.1  

>M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin protein.
          Length = 1274

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 401  HGRR*PLTIRWAVCPSAYKGNKKKCVCPLRRTTGVYWI 514
            HG   PL +R A+C  A    KKK V  LR + G  W+
Sbjct: 1177 HGEE-PLALRHAICEIAANYKKKKHVFKLRLSNGSEWL 1213


>AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form betaI
            sigma3 protein.
          Length = 1028

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 401  HGRR*PLTIRWAVCPSAYKGNKKKCVCPLRRTTGVYWI 514
            HG   PL +R A+C  A    KKK V  LR + G  W+
Sbjct: 931  HGEE-PLALRHAICEIAANYKKKKHVFKLRLSNGSEWL 967


>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythrocytic
            (includes spherocytosis, clinical type I) variant
            protein.
          Length = 2332

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 401  HGRR*PLTIRWAVCPSAYKGNKKKCVCPLRRTTGVYWI 514
            HG   PL +R A+C  A    KKK V  LR + G  W+
Sbjct: 2235 HGEE-PLALRHAICEIAANYKKKKHVFKLRLSNGSEWL 2271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,384,977
Number of Sequences: 237096
Number of extensions: 2205896
Number of successful extensions: 4028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4027
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)