BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4604
(815 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487781-1|AAL96668.1| 533|Anopheles gambiae cytochrome P450 CY... 25 2.1
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 25 3.7
>AF487781-1|AAL96668.1| 533|Anopheles gambiae cytochrome P450
CYP9L1 protein protein.
Length = 533
Score = 25.4 bits (53), Expect = 2.1
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -3
Query: 666 IFFYVFILELRN*IYI*IKH*MDFFRNYLMPC 571
+ + + I+ + +Y+ + H DFF+ Y +PC
Sbjct: 5 LMYVIGIVSVLVALYVYLTHNNDFFKKYPIPC 36
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 24.6 bits (51), Expect = 3.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 449 SFKIKYNFIFMILGRLYFYHYLLLISLKLYVNFY 550
S + YN + G L+ LLL++LKL + FY
Sbjct: 462 SLGLVYNQTLLWFGVLFAPPLLLLVALKLLLVFY 495
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,356
Number of Sequences: 2352
Number of extensions: 11890
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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