Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4593
         (712 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.               30   7.1  
BT009799-1|AAP88801.1|  911|Homo sapiens general transcription f...    30   7.1  
BC020981-1|AAH20981.1|  911|Homo sapiens general transcription f...    30   7.1  
BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.       30   7.1  
AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.              30   7.1  

>D13636-1|BAA02800.1|  911|Homo sapiens KIAA0011 protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 387 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPSMV-F 217
           E  E IP +  +H  +   +   PY  +  +S     QR  LP    L+  N   S+   
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383

Query: 216 PERYDMSFFKRG-LW 175
           PER+D+SFF  G LW
Sbjct: 384 PERWDVSFFTGGPLW 398


>BT009799-1|AAP88801.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 387 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPSMV-F 217
           E  E IP +  +H  +   +   PY  +  +S     QR  LP    L+  N   S+   
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383

Query: 216 PERYDMSFFKRG-LW 175
           PER+D+SFF  G LW
Sbjct: 384 PERWDVSFFTGGPLW 398


>BC020981-1|AAH20981.1|  911|Homo sapiens general transcription
           factor IIIC, polypeptide 2, beta 110kDa protein.
          Length = 911

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 387 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPSMV-F 217
           E  E IP +  +H  +   +   PY  +  +S     QR  LP    L+  N   S+   
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383

Query: 216 PERYDMSFFKRG-LW 175
           PER+D+SFF  G LW
Sbjct: 384 PERWDVSFFTGGPLW 398


>BC000212-1|AAH00212.1|  585|Homo sapiens GTF3C2 protein protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 387 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPSMV-F 217
           E  E IP +  +H  +   +   PY  +  +S     QR  LP    L+  N   S+   
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383

Query: 216 PERYDMSFFKRG-LW 175
           PER+D+SFF  G LW
Sbjct: 384 PERWDVSFFTGGPLW 398


>AC109828-1|AAY24049.1|  534|Homo sapiens unknown protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -2

Query: 387 ELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPSMV-F 217
           E  E IP +  +H  +   +   PY  +  +S     QR  LP    L+  N   S+   
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383

Query: 216 PERYDMSFFKRG-LW 175
           PER+D+SFF  G LW
Sbjct: 384 PERWDVSFFTGGPLW 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,807,483
Number of Sequences: 237096
Number of extensions: 2981532
Number of successful extensions: 10103
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10103
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)