Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4591
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    49   1e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.7  
UniRef50_Q4FWB3 Cluster: Putative uncharacterized protein; n=3; ...    35   2.3  
UniRef50_Q4XWR2 Cluster: Putative uncharacterized protein; n=2; ...    33   5.3  
UniRef50_P54602 Cluster: Endonuclease yhcR precursor; n=3; Bacil...    33   9.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 648 YLLLRWLDEFTAHLVLSGYWSP 583
           +LLLRW+DE TAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 460 AGWWYVLARSHKRSYHQ 410
           A WWY+ AR+HKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q4FWB3 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major strain Friedlin
          Length = 1190

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 2   FARFFFFYNAILFVFKAVSCPQLRKIVLLFANRCREELIIENTKKTTF 145
           FA +  +Y+A+LF+    +   +R+I LL  N C   L+++N +   F
Sbjct: 277 FAGWCIYYSAMLFIMAIFTEDVVRRICLLLFNSCMVGLLVDNNRGAVF 324


>UniRef50_Q4XWR2 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 135

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +2

Query: 11  FFFFYNAILFVFKAVSC--PQLRKIVLLFANRCREELIIENTKKTTFSENKS*LDRFIAP 184
           FFFF+N  LFV +       ++ +   +  N    + I+   K  +  ENK   ++ I  
Sbjct: 9   FFFFFNVSLFVCRTAKYEDSEIIENSTVKNNDITNKNIMNVLKSVSLEENKK-TEKNILY 67

Query: 185 EIPCILNFMKIVGAVSEIQIIYRYINKQELLV*RYKIIKS*NI 313
           ++   +NF+KI+  ++  Q+ Y  I   +    + K IK  NI
Sbjct: 68  DLSYYMNFLKILSGINSQQMEYEGIINIDNTKKKPKNIKDVNI 110


>UniRef50_P54602 Cluster: Endonuclease yhcR precursor; n=3;
           Bacillus|Rep: Endonuclease yhcR precursor - Bacillus
           subtilis
          Length = 1217

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 432 DRASTYHHPAYFCREAELRFGLKGGAAVVTILRPYN-LYLKVGGASK 569
           D   TYH P     E +LRFG K    + T+L P + + +KVG  +K
Sbjct: 409 DAPETYHTPKNDADENQLRFGKKASDYLKTVLSPGDKITVKVGSEAK 455


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,523,121
Number of Sequences: 1657284
Number of extensions: 14619166
Number of successful extensions: 27747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27724
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)