Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4589
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ... 35 0.10
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote... 35 0.10
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ... 35 0.10
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB... 35 0.10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 33 0.41
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 32 0.71
Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor pr... 31 1.6
X76217-1|CAA53807.1| 779|Drosophila melanogaster a box binding ... 31 1.6
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 31 1.6
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 31 1.6
AY102698-1|AAM27527.1| 80|Drosophila melanogaster RH08745p pro... 29 5.0
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 29 5.0
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 29 8.7
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 29 8.7
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 29 8.7
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 29 8.7
>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
protein protein.
Length = 2515
Score = 35.1 bits (77), Expect = 0.10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 329 IYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKSQPP*RLRHQTSMA 177
IY +N P+N NK Q ++ L W Q + D+N+++S +L T A
Sbjct: 2188 IYRYHNNDPINPNKPQNYMIDLDSWLQLFGYDLNNMQSSRYTKLAQYTPQA 2238
>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
protein.
Length = 2731
Score = 35.1 bits (77), Expect = 0.10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 329 IYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKSQPP*RLRHQTSMA 177
IY +N P+N NK Q ++ L W Q + D+N+++S +L T A
Sbjct: 2404 IYRYHNNDPINPNKPQNYMIDLDSWLQLFGYDLNNMQSSRYTKLAQYTPQA 2454
>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
protein.
Length = 2731
Score = 35.1 bits (77), Expect = 0.10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 329 IYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKSQPP*RLRHQTSMA 177
IY +N P+N NK Q ++ L W Q + D+N+++S +L T A
Sbjct: 2404 IYRYHNNDPINPNKPQNYMIDLDSWLQLFGYDLNNMQSSRYTKLAQYTPQA 2454
>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
protein.
Length = 2731
Score = 35.1 bits (77), Expect = 0.10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 329 IYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKSQPP*RLRHQTSMA 177
IY +N P+N NK Q ++ L W Q + D+N+++S +L T A
Sbjct: 2404 IYRYHNNDPINPNKPQNYMIDLDSWLQLFGYDLNNMQSSRYTKLAQYTPQA 2454
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 33.1 bits (72), Expect = 0.41
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 383 DIDRSQQTQLDLFTDATAIYYSSSNQPLNAN-KLQTTVLTLRQWFQNWPIDINSVK 219
DI + + + F D TAI S S P+ A +L ++ +++W +W I +N K
Sbjct: 655 DIPTNSRLTVSTFADDTAIL-SRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQK 709
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 32.3 bits (70), Expect = 0.71
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 395 DLPN-DIDRSQQTQLDLFTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVK 219
D+P D+ ++ L F D + Y S + A+ +Q +W + W I INS K
Sbjct: 657 DMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSK 716
Query: 218 S 216
S
Sbjct: 717 S 717
>Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor
protein.
Length = 949
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 712 TGWETRPTE--KIRRNTQCAASSSTSQRCSTNLA 617
+GW RPT+ K RR+T + SSS CST+ A
Sbjct: 660 SGWTCRPTQTTKCRRSTCSSISSSNRAACSTHPA 693
>X76217-1|CAA53807.1| 779|Drosophila melanogaster a box binding
factor (ABF), alsocalled dGATA-b protein.
Length = 779
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 712 TGWETRPTE--KIRRNTQCAASSSTSQRCSTNLA 617
+GW RPT+ K RR+T + SSS CST+ A
Sbjct: 490 SGWTCRPTQTTKCRRSTCSSISSSNRAACSTHPA 523
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 398 ADLPNDIDRSQQTQLDLFTDATAIYYSSSNQPLNANKLQTTVLT-LRQWFQNWPIDINSV 222
AD P D + + T F D TAI S S P+ A L + LT + +W +W I IN
Sbjct: 652 ADFPIDYNLTTST----FADDTAIL-SRSKCPIKATALLSRHLTSVERWLADWRISINVQ 706
Query: 221 K 219
K
Sbjct: 707 K 707
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 398 ADLPNDIDRSQQTQLDLFTDATAIYYSSSNQPLNANKLQTTVLT-LRQWFQNWPIDINSV 222
AD P D + + T F D TAI S S P+ A L + LT + +W +W I IN
Sbjct: 652 ADFPIDYNLTTST----FADDTAIL-SRSKCPIKATALLSRHLTSVERWLADWRISINVQ 706
Query: 221 K 219
K
Sbjct: 707 K 707
>AY102698-1|AAM27527.1| 80|Drosophila melanogaster RH08745p
protein.
Length = 80
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 682 IRRNTQCAASSSTSQRCSTNLAQRFGFHTWTCQTVSCSSFE 560
+ R+ CA S+ Q CST R H W Q V C ++
Sbjct: 28 LSRHRFCARSAGCGQCCSTVARSRKCDHQWRLQGVQCPRWQ 68
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 356 LDLFTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKSQPP 207
L + D A+ YSS+ A LQ + TL W + W + +N K+ P
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINP 724
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 347 FTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVK 219
+ D TA+ S + + LQ + +QW +NW + IN+ K
Sbjct: 679 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEK 721
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -3
Query: 386 NDIDRSQQTQLDLFTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKS 216
+DI ++ L LF D A+Y + + +Q+ + L +++ W I IN K+
Sbjct: 682 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKT 738
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 347 FTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVK 219
+ D TA+ S + + LQ + +QW +NW + IN+ K
Sbjct: 481 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEK 523
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -3
Query: 386 NDIDRSQQTQLDLFTDATAIYYSSSNQPLNANKLQTTVLTLRQWFQNWPIDINSVKS 216
+DI ++ L LF D A+Y + + +Q+ + L +++ W I IN K+
Sbjct: 630 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKT 686
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,061,717
Number of Sequences: 53049
Number of extensions: 602418
Number of successful extensions: 1211
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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