Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4589
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 116 NWFKRDFCIFTR 81
           NWF+  FC F R
Sbjct: 532 NWFQNTFCYFRR 543


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 514 VSPLPYYGWSSAKFHPLSA 458
           +SP+   G+ +  FHPLS+
Sbjct: 263 LSPIAVNGYRTLFFHPLSS 281


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 724 AKSTTGWETRPTEKIRRNTQ 665
           A  TTG  T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 726 SQNLPLDGKRDPLRRSGEILSVL 658
           SQN   DGK D    +  +LSVL
Sbjct: 4   SQNNLTDGKEDQPENTFSLLSVL 26


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 726 SQNLPLDGKRDPLRRSGEILSVLPLLRHHKGVQQI 622
           +   PLD   DPL      + V  +L HH+ ++++
Sbjct: 645 AMGFPLDKPVDPLLLVLSNIHVKEVLVHHREMEEL 679


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 726 SQNLPLDGKRDPLRRSGEILSVLPLLRHHKGVQQI 622
           +   PLD   DPL      + V  +L HH+ ++++
Sbjct: 645 AMGFPLDKPVDPLLLVLSNIHVKEVLVHHREMEEL 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,256
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)