Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4578
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   1.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   1.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   2.9  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   6.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   8.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   8.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   8.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +3

Query: 42  YKQVLTRAHEREFGTIDGDNKPIWQVAEEREENKHLQKENAPYGEYGGWHKAA 200
           YKQ   +  +R    I    KP   + EE+ + ++L++ NA   E G   K A
Sbjct: 20  YKQGFCQPTQRTMSKIQW-RKPKPAMVEEKTQLRYLEELNALRTELGASTKLA 71


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 168 YGEYGGWHKAAKVDSPTVTTTLKNLGALYR 257
           Y E   W+  A +DS T    +K   ++Y+
Sbjct: 58  YNEGQAWNIEANIDSYTNAAAVKEFLSIYK 87


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 168 YGEYGGWHKAAKVDSPTVTTTLKNLGALYR 257
           Y E   W+  A +DS T    +K   ++Y+
Sbjct: 58  YNEGQAWNIEANIDSYTNAAAVKEFLSIYK 87


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 218 SDHNAEEPGRAVPAPGQVRGRRDPR 292
           S+     PGRA P    +R R  PR
Sbjct: 909 SNVTPRSPGRAWPGDSDIRQRPIPR 933


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 159 NAPYGEYGGWHKAAKVDSPTV 221
           N PY    G  K  K + PTV
Sbjct: 599 NLPYSSLYGRFKRGKYEEPTV 619


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 178 YSPYGAFSFCKCLFSSRSSAT 116
           +SPY A +     F+++ SAT
Sbjct: 124 WSPYAALAIAAQYFNAKPSAT 144


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 93  RQWFRILVHEPASTPAC 43
           R   +I  ++PASTP C
Sbjct: 879 RAILKIPSYKPASTPGC 895


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 181 PYSPYGAFS 155
           PY PYG F+
Sbjct: 228 PYPPYGTFN 236


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = +3

Query: 153 KENAPYGEYGGWHKAAKVDSPTVTTT 230
           K   PY  Y  WH    V+   V  T
Sbjct: 137 KNIEPYNNYYIWHPGKIVNGKRVPPT 162


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 99 CHRQWFRI 76
          C R WFRI
Sbjct: 21 CSRDWFRI 28


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = +3

Query: 153 KENAPYGEYGGWHKAAKVDSPTVTTT 230
           K   PY  Y  WH    V+   V  T
Sbjct: 137 KNIEPYNNYYIWHPGKIVNGKRVPPT 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,337
Number of Sequences: 438
Number of extensions: 1950
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)