Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4576
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117342-1|AAI17343.1| 130|Homo sapiens chromosome 4 open readi... 31 4.1
BC056900-1|AAH56900.1| 1504|Homo sapiens nischarin protein. 31 4.1
BC038102-1|AAH38102.1| 1504|Homo sapiens nischarin protein. 31 4.1
AL117432-1|CAB55920.1| 993|Homo sapiens hypothetical protein pr... 31 4.1
AK172776-1|BAD18758.1| 130|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK074237-1|BAB85027.1| 130|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF082516-1|AAC33104.1| 1504|Homo sapiens I-1 receptor candidate ... 31 4.1
AB023192-1|BAA76819.1| 1528|Homo sapiens KIAA0975 protein protein. 31 4.1
BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 bindi... 30 7.1
BC063469-1|AAH63469.1| 303|Homo sapiens RELL2 protein protein. 30 7.1
AY904026-1|AAW69392.1| 1972|Homo sapiens tumor protein p53 bindi... 30 7.1
AY038048-1|AAK71497.1| 996|Homo sapiens SEZ6 protein. 30 7.1
AF502129-1|AAM22213.1| 996|Homo sapiens HSEZ6b protein protein. 30 7.1
AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor suppressor-bi... 30 7.1
AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein... 30 7.1
>BC117342-1|AAI17343.1| 130|Homo sapiens chromosome 4 open reading
frame 26 protein.
Length = 130
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 416 PTHLWPHLPRVHCRHPNKPALLSLDRNR 499
P H +P PR+H R PN+P + S +R
Sbjct: 71 PFHFFPRRPRIHFRFPNRPFVPSRCNHR 98
>BC056900-1|AAH56900.1| 1504|Homo sapiens nischarin protein.
Length = 1504
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 403 PVDVANP-PVATSTTGPLQT--PQQASTPIVRPEQT 501
PV+V P P A S +GP +T P +AST + PE+T
Sbjct: 1055 PVEVPAPAPAAASASGPAKTPAPAEASTSALVPEET 1090
>BC038102-1|AAH38102.1| 1504|Homo sapiens nischarin protein.
Length = 1504
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 403 PVDVANP-PVATSTTGPLQT--PQQASTPIVRPEQT 501
PV+V P P A S +GP +T P +AST + PE+T
Sbjct: 1055 PVEVPAPAPAAASASGPAKTPAPAEASTSALVPEET 1090
>AL117432-1|CAB55920.1| 993|Homo sapiens hypothetical protein
protein.
Length = 993
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 403 PVDVANP-PVATSTTGPLQT--PQQASTPIVRPEQT 501
PV+V P P A S +GP +T P +AST + PE+T
Sbjct: 544 PVEVPAPAPAAASASGPAKTPAPAEASTSALVPEET 579
>AK172776-1|BAD18758.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ23937 fis, clone COLF6762. ).
Length = 130
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 416 PTHLWPHLPRVHCRHPNKPALLSLDRNR 499
P H +P PR+H R PN+P + S +R
Sbjct: 71 PFHFFPRRPRIHFRFPNRPFVPSRCNHR 98
>AK074237-1|BAB85027.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ23657 fis, clone COLF1189. ).
Length = 130
Score = 31.1 bits (67), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 416 PTHLWPHLPRVHCRHPNKPALLSLDRNR 499
P H +P PR+H R PN+P + S +R
Sbjct: 71 PFHFFPRRPRIHFRFPNRPFVPSRCNHR 98
>AF082516-1|AAC33104.1| 1504|Homo sapiens I-1 receptor candidate
protein protein.
Length = 1504
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 403 PVDVANP-PVATSTTGPLQT--PQQASTPIVRPEQT 501
PV+V P P A S +GP +T P +AST + PE+T
Sbjct: 1055 PVEVPAPAPAAASASGPAKTPAPAEASTSALVPEET 1090
>AB023192-1|BAA76819.1| 1528|Homo sapiens KIAA0975 protein protein.
Length = 1528
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 403 PVDVANP-PVATSTTGPLQT--PQQASTPIVRPEQT 501
PV+V P P A S +GP +T P +AST + PE+T
Sbjct: 1079 PVEVPAPAPAAASASGPAKTPAPAEASTSALVPEET 1114
>BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 binding
protein 1 protein.
Length = 1972
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 391 ENGNPVDVANPP-VATSTTGP-LQTPQQASTPIVRP 492
++G PV++ NPP + ST P TP STP+ P
Sbjct: 410 QSGEPVELENPPLLPESTVSPQASTPISQSTPVFPP 445
>BC063469-1|AAH63469.1| 303|Homo sapiens RELL2 protein protein.
Length = 303
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 422 HLWPHLPRVHCRHPNKPALLSLDRNRRAKRQKQWSKAAIKSV 547
HL P P +HC +P L+ R++ K + + + + SV
Sbjct: 125 HLGPAAPCIHCSRSKRPPLVRQGRSKEGKSRPRTGETTVFSV 166
>AY904026-1|AAW69392.1| 1972|Homo sapiens tumor protein p53 binding
protein, 1 protein.
Length = 1972
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 391 ENGNPVDVANPP-VATSTTGP-LQTPQQASTPIVRP 492
++G PV++ NPP + ST P TP STP+ P
Sbjct: 410 QSGEPVELENPPLLPESTVSPQASTPISQSTPVFPP 445
>AY038048-1|AAK71497.1| 996|Homo sapiens SEZ6 protein.
Length = 996
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 467 CWGVCSGPVVDVATGGLATSTGFPFSLTNSVTVH 366
C G C G V+ AT G S GFP + +N++T H
Sbjct: 414 CIGECPG-VIRNATTGRIVSPGFPGNYSNNLTCH 446
>AF502129-1|AAM22213.1| 996|Homo sapiens HSEZ6b protein protein.
Length = 996
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 467 CWGVCSGPVVDVATGGLATSTGFPFSLTNSVTVH 366
C G C G V+ AT G S GFP + +N++T H
Sbjct: 414 CIGECPG-VIRNATTGRIVSPGFPGNYSNNLTCH 446
>AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor
suppressor-binding protein 1 protein.
Length = 1972
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 391 ENGNPVDVANPP-VATSTTGP-LQTPQQASTPIVRP 492
++G PV++ NPP + ST P TP STP+ P
Sbjct: 410 QSGEPVELENPPLLPESTVSPQASTPISQSTPVFPP 445
>AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein
protein.
Length = 1984
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 391 ENGNPVDVANPP-VATSTTGP-LQTPQQASTPIVRP 492
++G PV++ NPP + ST P TP STP+ P
Sbjct: 424 QSGEPVELENPPLLPESTVSPQASTPISQSTPVFPP 459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.136 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,725,312
Number of Sequences: 237096
Number of extensions: 2428221
Number of successful extensions: 7123
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7123
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -