Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4573
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1833|AAF52909.2|  561|Drosophila melanogaster CG4972-PA...    75   9e-14
AY113380-1|AAM29385.1|  561|Drosophila melanogaster RE02878p pro...    73   3e-13
AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p pro...    36   0.070
AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-P...    36   0.070

>AE014134-1833|AAF52909.2|  561|Drosophila melanogaster CG4972-PA
           protein.
          Length = 561

 Score = 74.9 bits (176), Expect = 9e-14
 Identities = 50/150 (33%), Positives = 75/150 (50%)
 Frame = +1

Query: 31  IQNLVSNVARIARALASHIYNITDDENDEDAGLYDDVLNVDEAAIRYWYNYLSSQSRSAH 210
           +++ ++    IA ALAS +Y +     D  + +++  L + E  I  ++   S      H
Sbjct: 408 VEHTLNTTRIIAEALASFMYKV-----DPTSSIFEGQLAIKEENILPYFGVKSI----LH 458

Query: 211 IVTTSPNGGVTGALERVLSRYMEVTVSTHAVDKREPEYTLYSPTSATLYVYSVKPAVFDL 390
                 N  V  A E+ L+    V +     D R+PE+  Y+     L VY VKPA+FDL
Sbjct: 459 ------NNDVKDAFEKYLNN---VKIIYDKPDARDPEFMFYNENEVKLNVYRVKPAIFDL 509

Query: 391 ILTLAIVCYLAVVYFAIQAFPRFYEEYAKI 480
            LT  I  YL  V+ AIQ FPRFY+E +K+
Sbjct: 510 FLTFVIGAYLLAVFLAIQYFPRFYDEVSKL 539


>AY113380-1|AAM29385.1|  561|Drosophila melanogaster RE02878p
           protein.
          Length = 561

 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 49/150 (32%), Positives = 75/150 (50%)
 Frame = +1

Query: 31  IQNLVSNVARIARALASHIYNITDDENDEDAGLYDDVLNVDEAAIRYWYNYLSSQSRSAH 210
           +++ ++    IA ALAS +Y +     D  + +++  L + E  I  ++   S      H
Sbjct: 408 VEHTLNTTRIIAEALASFMYKV-----DPTSSIFEGQLAIKEENILPYFGVKSI----LH 458

Query: 211 IVTTSPNGGVTGALERVLSRYMEVTVSTHAVDKREPEYTLYSPTSATLYVYSVKPAVFDL 390
                 N  V  A E+ L+    V +     D R+PE+  Y+     L VY VKPA+FDL
Sbjct: 459 ------NNDVKDAFEKYLNN---VKIIYDKPDARDPEFMFYNENEVKLNVYRVKPAIFDL 509

Query: 391 ILTLAIVCYLAVVYFAIQAFPRFYEEYAKI 480
            LT  I  YL  V+ AIQ FPRFY+E +++
Sbjct: 510 FLTFVIGAYLLAVFLAIQYFPRFYDEVSEL 539


>AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p protein.
          Length = 1747

 Score = 35.5 bits (78), Expect = 0.070
 Identities = 24/93 (25%), Positives = 45/93 (48%)
 Frame = +1

Query: 127  LYDDVLNVDEAAIRYWYNYLSSQSRSAHIVTTSPNGGVTGALERVLSRYMEVTVSTHAVD 306
            LY +VL    A +R W+N  ++QSR  + +       V+     + S  ++  ++     
Sbjct: 1550 LYTEVLRKLPAVVRRWWN--ATQSRQKNFIDNLTTNYVSSL---ICSEELKA-IANRKEK 1603

Query: 307  KREPEYTLYSPTSATLYVYSVKPAVFDLILTLA 405
                + T++S T   L VY++  A  +L++TLA
Sbjct: 1604 HENMQVTVHSSTREVLAVYAIDEARMELVITLA 1636


>AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-PA
            protein.
          Length = 1747

 Score = 35.5 bits (78), Expect = 0.070
 Identities = 24/93 (25%), Positives = 45/93 (48%)
 Frame = +1

Query: 127  LYDDVLNVDEAAIRYWYNYLSSQSRSAHIVTTSPNGGVTGALERVLSRYMEVTVSTHAVD 306
            LY +VL    A +R W+N  ++QSR  + +       V+     + S  ++  ++     
Sbjct: 1550 LYTEVLRKLPAVVRRWWN--ATQSRQKNFIDNLTTNYVSSL---ICSEELKA-IANRKEK 1603

Query: 307  KREPEYTLYSPTSATLYVYSVKPAVFDLILTLA 405
                + T++S T   L VY++  A  +L++TLA
Sbjct: 1604 HENMQVTVHSSTREVLAVYAIDEARMELVITLA 1636


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,174,393
Number of Sequences: 53049
Number of extensions: 536812
Number of successful extensions: 1337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)