Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4571
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077542-13|AAC26302.1|  294|Caenorhabditis elegans Hypothetical...   125   3e-29
Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF077542-13|AAC26302.1|  294|Caenorhabditis elegans Hypothetical
           protein Y57G7A.10a protein.
          Length = 294

 Score =  125 bits (302), Expect = 3e-29
 Identities = 69/190 (36%), Positives = 102/190 (53%)
 Frame = +2

Query: 50  LGNEKHVILEQVIYAALDCHMYCIAMLCLVMLSNEFPGSLRVMKLKAAVLEAEEKFDEAL 229
           LG+E+  +LEQV  AALD     +A  C+  L  +FP S RV+KLKA  LE+ E + +AL
Sbjct: 47  LGDEQWAVLEQVCIAALDAARVDLAQDCIDQLHAQFPKSNRVLKLKAMQLESTEHYQKAL 106

Query: 230 ELLDNIIKVDETNSXXXXXXXXXXXXQGYIVEAIKELVDYLKKFMSDVEAWQELCNLYLQ 409
           ++ + +++ +  N+            QG  ++AI+ + DYLK F++D EAW +L  L+L 
Sbjct: 107 DIYERLVEDEPNNNSFRKRKVAVLLAQGKRLDAIRAINDYLKIFLNDPEAWLQLSELFLL 166

Query: 410 VQDYSRAVFCAEEXXXXXXXXXXXXXXXADIRYTMGGIENLELAKLYYCPICETQSR*YE 589
             D ++AV C EE               AD+RYT GG EN+ELA+ YY    +       
Sbjct: 167 ENDVAKAVHCLEECVLISPLNSMYFRRLADLRYTQGGAENVELARSYYERALKINPTDLR 226

Query: 590 VAAGSVLDNN 619
              G +L NN
Sbjct: 227 SQYGILLSNN 236


>Z83120-3|CAB05587.1|  419|Caenorhabditis elegans Hypothetical
           protein R06A4.4b protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 31  LRKSKQTWKRETRYIGASNLCSIGLSHVLHSNVVPCDAIQ*VSW 162
           LR  K   ++E+ +IG  N+ ++    VL+  +  CDAI   SW
Sbjct: 330 LRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAI--ASW 371


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 31  LRKSKQTWKRETRYIGASNLCSIGLSHVLHSNVVPCDAIQ*VSW 162
           LR  K   ++E+ +IG  N+ ++    VL+  +  CDAI   SW
Sbjct: 794 LRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAI--ASW 835


>Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical
           protein F25C8.4 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 560 ICETQSR*YEVAAGSVLDNNKSTEPLQIIRGTVASPRKCGKLC 688
           IC T ++ Y  + G  L  N   + L I+ G    PR+ G++C
Sbjct: 335 ICRTYNKNYSPSCGQ-LTANLEMKVLDILTGKELGPREKGQIC 376


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,805
Number of Sequences: 27780
Number of extensions: 336524
Number of successful extensions: 920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)