Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4571
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   5.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   7.2  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 569 FHRLDSNTVLPTPDFRCRPLCTEYQLASDDASG 471
           FHRL SNT    P F    +  E   A D  SG
Sbjct: 223 FHRLTSNTFDYDPKFTKMTIDGESYTAQDGISG 255


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 569 FHRLDSNTVLPTPDFRCRPLCTEYQLASDDASG 471
           FHRL SNT    P F    +  E   A D  SG
Sbjct: 223 FHRLTSNTFDYDPKFTKMTIDGESYTAQDGISG 255


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 569 FHRLDSNTVLPTPDFRCRPLCTEYQLASDDASG 471
           FHRL SNT    P F    +  E   A D  SG
Sbjct: 223 FHRLTSNTFDYDPKFTKMTIDGESYTAQDGISG 255


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 548 YYCPICETQSR*YEVAAGSVLDNN 619
           Y+ PI   +++ Y  ++GSV+D N
Sbjct: 421 YFMPIGRPRAKDYGHSSGSVIDRN 444


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 8   HEALGMWFSERVNK 49
           HE L  WFS+ VN+
Sbjct: 184 HEKLRNWFSKNVNQ 197


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 82  SNLCSIGLSHVLHSNVVP 135
           S + ++ LSH LH N++P
Sbjct: 350 SAILAMRLSHPLHGNLLP 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,268
Number of Sequences: 438
Number of extensions: 4001
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)