Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4565
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   7.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 451 EKLYTSSGTEAHQLFQSDPAAFKTYHEGYQQQLKKWPINPLD 576
           EK+   + T   +L Q  P+  +T  EGY Q+   + +  ++
Sbjct: 528 EKIGLDANTNGKRLQQMMPSKHRTTAEGYTQRPVNYAVETIE 569


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = +1

Query: 157 NEKRKKLNEQLQNDDQEDILFKESKGKKAKHLKTS--KDENINK----LEASNYVKIDFK 318
           NE+RKK  EQ+  +++  +  ++   K  K ++ S  K E++ +    +EA     +   
Sbjct: 396 NERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATL 455

Query: 319 KEKLRKMLQE 348
           K++ + +L+E
Sbjct: 456 KDETKVLLEE 465


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/45 (20%), Positives = 25/45 (55%)
 Frame = +1

Query: 223  ESKGKKAKHLKTSKDENINKLEASNYVKIDFKKEKLRKMLQENSL 357
            +  G+K K L+ SKD+    +     V ++ ++E+ +++++   +
Sbjct: 961  QEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKV 1005


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 648  AVTLCTTSSSVLRFGSHYTKCRS 716
            AVT CTT  +V   G     CRS
Sbjct: 1807 AVTRCTTCQTVFWIGLRKHHCRS 1829


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 648  AVTLCTTSSSVLRFGSHYTKCRS 716
            AVT CTT  +V   G     CRS
Sbjct: 1808 AVTRCTTCQTVFWIGLRKHHCRS 1830


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,880
Number of Sequences: 2352
Number of extensions: 11548
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)