Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4565
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   3.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.4  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.4  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 428 LHNSGTSMKNYTHHQVQKLINYSRVIPLP 514
           +HN+  +  NY + ++   INY   IP+P
Sbjct: 312 IHNNN-NYNNYNNKKLYYNINYIEQIPVP 339


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 151  IINEKRKKLNEQLQNDDQEDILFKESKGKKAKHLKTSKD 267
            + +E RK L       +Q  ++F + KG+   H   SKD
Sbjct: 939  VTDETRKILEPFGFGFEQRGLVFVKGKGQLLTHYLVSKD 977


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +1

Query: 157 NEKRKKLNEQLQNDDQEDILFKESKGKKAKHLKTSKDEN 273
           + K K  N    N D E +   E +   +K +   K+EN
Sbjct: 57  HNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEEN 95


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 684 EGPNWMWYTM*QRSF 640
           EG NW W T+ + +F
Sbjct: 22  EGSNWNWNTLLRPNF 36


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 684 EGPNWMWYTM*QRSF 640
           EG NW W T+ + +F
Sbjct: 66  EGSNWNWNTLLRPNF 80


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 684 EGPNWMWYTM*QRSF 640
           EG NW W T+ + +F
Sbjct: 66  EGSNWNWNTLLRPNF 80


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 684 EGPNWMWYTM*QRSF 640
           EG NW W T+ + +F
Sbjct: 66  EGSNWNWNTLLRPNF 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,465
Number of Sequences: 438
Number of extensions: 3805
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)