Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4564
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 283 8e-77
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 234 5e-62
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 137 1e-32
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 127 8e-30
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 105 4e-23
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 105 5e-23
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 103 2e-22
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 102 3e-22
10_08_0620 - 19321612-19323237 97 1e-20
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 84 1e-16
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 80 2e-15
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 50 2e-06
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 49 4e-06
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 48 6e-06
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 48 1e-05
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 46 3e-05
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 44 2e-04
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 43 2e-04
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653... 28 9.3
05_01_0125 - 853691-853984,854027-854659 28 9.3
03_01_0281 + 2160480-2162003 28 9.3
01_01_0004 + 15599-15976,16383-16474,16558-17258,17501-17571,179... 28 9.3
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 283 bits (695), Expect = 8e-77
Identities = 144/234 (61%), Positives = 181/234 (77%)
Frame = +3
Query: 57 RILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGA 236
R+LK+ RM++FIGA+AI DLVK+TLGPKGMDKIL S GR V VTNDGA
Sbjct: 3 RVLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 61
Query: 237 TILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIA 416
TILKS+ +DNPAAK+LVD+SKVQD+EVGDGTTSV V KL+ K+HP TIIA
Sbjct: 62 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 121
Query: 417 GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 596
G+R+A + A+ AL E + D+++N+++ R DL NIA TTLSSKILS KE+F +LAVDA
Sbjct: 122 GYRMAVECARNALLERTMDNKENIDK--FRSDLMNIAMTTLSSKILSQDKEYFAELAVDA 179
Query: 597 VLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIA 758
VLRLKGS NL+AIQI+KI GG L++SFLDEGF+L+KK+G+ QPK++ENA IL+A
Sbjct: 180 VLRLKGSTNLEAIQILKIPGGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVA 233
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 234 bits (573), Expect = 5e-62
Identities = 133/234 (56%), Positives = 160/234 (68%)
Frame = +3
Query: 57 RILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGA 236
R+LK+ RM+SF+G +AI DLVK+TLGPKGMDKIL S GR V VTNDGA
Sbjct: 4 RLLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 62
Query: 237 TILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIA 416
TILKS+ +DNPAAK+LVD+SKVQD+EVGDGTTSV V KL+ K+HP TIIA
Sbjct: 63 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
Query: 417 GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDA 596
+ SD L NIA TTLSSKILS KE+F LAVDA
Sbjct: 123 D-KFRSD-------------------------LMNIAMTTLSSKILSQDKEYFAGLAVDA 156
Query: 597 VLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIA 758
VLRLKGS NL+AIQI+K +GG L++SFLDEGF+L+KK+G+ QPK++ENA IL+A
Sbjct: 157 VLRLKGSTNLEAIQILKKTGGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVA 210
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 137 bits (331), Expect = 1e-32
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Frame = +3
Query: 105 MSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKIL 284
+S+ + D V++TLGP+GMDK++ + G ++NDGATI++ + + +PAAKIL
Sbjct: 26 VSNINACTVVADTVRTTLGPRGMDKLIHD---DKGGTTISNDGATIMRLLDIIHPAAKIL 82
Query: 285 VDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE- 461
VD++K QD EVGDGTT+V + IE +HP ++I +R A A + + +
Sbjct: 83 VDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDL 142
Query: 462 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQI 641
A+ K+L E + L A TTLSSK++ KE F + VDAVL + L + I
Sbjct: 143 ATSIEGKSLEEK--KELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAISNDDRLNLLGI 200
Query: 642 IKISGGLLEESFLDEGFLLNKKVGV----HQPKKVENANILI 755
K+ GG + +SFL G K QPKK + IL+
Sbjct: 201 KKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLSPKILL 242
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 127 bits (307), Expect = 8e-30
Identities = 82/214 (38%), Positives = 123/214 (57%), Gaps = 5/214 (2%)
Frame = +3
Query: 129 AIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQD 308
A+ +++++LGPKGMDK+L S G V +TNDGATIL+ + VDN AK++V++S QD
Sbjct: 39 AVARILRTSLGPKGMDKMLQS---PDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQD 95
Query: 309 EEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKNL 488
E+GDGTT V V KL+E+ +HP I G+ +AS A L S H+
Sbjct: 96 YEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHIS--HKFEF 153
Query: 489 NEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISG 656
+ ++ L TTLSSKI++ K ++AV AVL + + NL I++ G
Sbjct: 154 SATNIE-PLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVG 212
Query: 657 GLLEESFLDEGFLLNKKVGVHQ-PKKVENANILI 755
G LE++ L G +++K + Q PK++E+A I I
Sbjct: 213 GKLEDTELVYGIIVDKDMSHPQMPKRIEDAKIAI 246
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 105 bits (252), Expect = 4e-23
Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Frame = +3
Query: 123 AIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKV 302
A A+ D V+++LGP+GMDK ++S G +V +TNDGATIL + + PAA++L ++S+
Sbjct: 35 ARAVADAVRTSLGPRGMDK-MISSGEQ--EVIITNDGATILSRMSLLQPAARMLAELSRS 91
Query: 303 QDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTII-AGWRIASDAAKQALAEASFDHQ 479
QD GDGTT+V V L+ HP A R+A+ A + A A
Sbjct: 92 QDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAI---- 147
Query: 480 KNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-----NLKAIQII 644
E S R L A T L+SK++S + + LAVDA L + +L+ I+++
Sbjct: 148 --PIELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVV 205
Query: 645 KISGGLLEESFLDEGFLLNKKV--GVHQPKKVENANILI 755
K GG ++++ L G + +KK P +VENA I +
Sbjct: 206 KKLGGTVDDTELIRGLIFDKKASHAAGGPTRVENAKIAV 244
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 105 bits (251), Expect = 5e-23
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 11/250 (4%)
Frame = +3
Query: 39 VSLN-PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQV 215
++LN P+ +LK+ ++ A A+ D++++TLGP+ M K+L+ SG +
Sbjct: 1 MALNAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDA---SGGI 57
Query: 216 EVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKL 395
VTNDG IL+ I + +PAAK ++++S+ QDEEVGDGTTSV V I++
Sbjct: 58 VVTNDGNAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHY 117
Query: 396 HPQTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHF 575
HP I + A + A L + + N A L + ++++ +K +
Sbjct: 118 HPTVICRAYTKALEDALAVLDKIAMHVDVNDRAAML-----GLVKSSIGTKFTGQFGDLI 172
Query: 576 TKLAVDAVLRL---KGSGN-----LKAIQIIKISGGLLEESFLDEGFLLNKKVGV--HQP 725
LA+DA G G K I++ K+ GG LE+S + +G + NK V
Sbjct: 173 ADLAIDATTTAGVDLGQGMREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMR 232
Query: 726 KKVENANILI 755
+K+ N I++
Sbjct: 233 RKIVNPRIIL 242
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 103 bits (246), Expect = 2e-22
Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 10/245 (4%)
Frame = +3
Query: 51 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 230
P+ +LK+ ++ A A+ D++++TLGP+ M K+L+ +G + VTND
Sbjct: 6 PVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDA---AGGIVVTND 62
Query: 231 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 410
G IL+ + + +PAAK ++++S+ QDEEVGDGTTSV V I++ HP I
Sbjct: 63 GNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVI 122
Query: 411 IAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAV 590
+ A D A L + + + RV + + ++++ +K + LA+
Sbjct: 123 CRAYTKALDDALSVLDKIAIP-----VDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAI 177
Query: 591 DAVLRL---KGSG-----NLKAIQIIKISGGLLEESFLDEGFLLNKKVGV--HQPKKVEN 740
DA G G K I++ K+ GG LE+S + +G ++NK V +K+ N
Sbjct: 178 DATTTAGVDLGQGIREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKMRRKIVN 237
Query: 741 ANILI 755
I++
Sbjct: 238 PRIIL 242
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 102 bits (245), Expect = 3e-22
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 32/213 (15%)
Frame = +3
Query: 207 GQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIE 386
G V +TNDGATIL+ + V++PAAK+LV+++++QD EVGDGTTSV + L+
Sbjct: 7 GDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVR 66
Query: 387 QKLHPQTIIAGWRIASDAAKQALAEASFDH----------QKNLNEA--------SLRVD 512
K+HP +II+G+R+ + + A+ H Q + EA +++VD
Sbjct: 67 NKIHPTSIISGYRLQYNFRFKTNVPAANPHCLTCFTIIYYQLAMREACKYVEEKLAVKVD 126
Query: 513 ------LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-------NLKAIQIIKIS 653
L N A+T++SSK++++ + F L VDAV +K + +K+I I+K
Sbjct: 127 KLGKDSLINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINILKAH 186
Query: 654 GGLLEESFLDEGFLLNK-KVGVHQPKKVENANI 749
G ++S+L G+ LN + P +V A I
Sbjct: 187 GKSAKDSYLLNGYALNTGRAAQGMPTRVTPARI 219
>10_08_0620 - 19321612-19323237
Length = 541
Score = 97.1 bits (231), Expect = 1e-20
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Frame = +3
Query: 129 AIGDLVKSTLGPKGMDKILVSCGRNSGQ-VEVTNDGATILKSIGVDNPAAKILVDMSKVQ 305
A+ +++LGP+GMDK++ S Q V +TNDGATIL + + PAA++L D+S+ Q
Sbjct: 37 AVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLADLSRSQ 96
Query: 306 DEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKN 485
D GDGTT+V V L+ HP + + A + L +
Sbjct: 97 DAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIP---- 152
Query: 486 LNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-----NLKAIQIIKI 650
E S R L A T L+SK++S + + LAVDA L + +L+ I+++K
Sbjct: 153 -VELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLLDLRDIRVVKK 211
Query: 651 SGGLLEESFLDEGFLLNKKVG--VHQPKKVENANILI 755
G ++++ L G +LNKK P ++ +A I +
Sbjct: 212 LGCTVDDTELIRGLVLNKKASHVAGGPTRIGDAKIAV 248
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 84.2 bits (199), Expect = 1e-16
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 4/209 (1%)
Frame = +3
Query: 141 LVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVG 320
+ +++LGP GM+K++++ + ++ VTND ATI+ + V +PAAKILV + Q EE+G
Sbjct: 37 ITRTSLGPNGMNKMVIN---HLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIG 93
Query: 321 DGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKNLNEAS 500
DG +LI LHP II G+ A + + L + +N++ +
Sbjct: 94 DGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRN 153
Query: 501 LRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLE 668
+ ++ + R+ ++SK ++ L DA +++ + N+ +++ K+ GG L
Sbjct: 154 -KEEVVLLMRSAVASKQF-GQEDILCPLVADACMQVCPKNPANFNVDNVRVAKLLGGGLH 211
Query: 669 ESFLDEGFLLNKKVGVHQPKKVENANILI 755
S + G +L K V K+VE A I +
Sbjct: 212 NSSVVRGMVL-KNDAVGSIKRVEKAKIAV 239
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 80.2 bits (189), Expect = 2e-15
Identities = 46/143 (32%), Positives = 78/143 (54%)
Frame = +3
Query: 123 AIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKV 302
A + D++K+ LGPKG K+LV +G +++T DG T+LK + + NP A ++ +
Sbjct: 26 AKGLQDVLKTNLGPKGTIKMLVG---GAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 303 QDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQK 482
QD+ GDGTTS + + I++ HP+ ++ G+ +A A + L + F
Sbjct: 83 QDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEK--FKTSV 140
Query: 483 NLNEASLRVDLENIARTTLSSKI 551
+ + R L+ IARTTL +K+
Sbjct: 141 VMGDEPDREILKMIARTTLRTKV 163
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNP----AAKILV 287
G + DLV TLGPKG + +L S G ++ NDG T+ K + +++P AK++
Sbjct: 71 GVNKLADLVGVTLGPKGRNVVLES---KYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 127
Query: 288 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 467
+ ++ GDGTT+ V K++ +P I G + A L + S
Sbjct: 128 QAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMS 187
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 49.2 bits (112), Expect = 4e-06
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPA----AKILV 287
G + DLV TLGPKG + +L S G + NDG T+ + + +++P AK++
Sbjct: 75 GVNKLADLVGVTLGPKGRNVVLES---KYGSPRIVNDGVTVAREVELEDPVENIGAKLVR 131
Query: 288 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 467
+ ++ GDGTT+ V K++ +P I G + A + L + S
Sbjct: 132 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLS 191
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIG----VDNPAAKILV 287
G + D VK T+GPKG ++ ++ G +VT DG T+ KSI V N A ++
Sbjct: 88 GVEELADAVKVTMGPKGRTVVIE---QSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVK 144
Query: 288 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASD 437
++ ++ GDGTT TV K + ++ + G +A D
Sbjct: 145 QVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVD 194
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 47.6 bits (108), Expect = 1e-05
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNS------GQVEVTNDGATILKSIG----VDNP 269
G + D VK T+GPK + + GRN G +VT DG T+ KSI V N
Sbjct: 50 GVEELADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNV 109
Query: 270 AAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDA 440
A ++ ++ ++ GDGTT TV K + ++ + G +A DA
Sbjct: 110 GASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDA 166
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSI----GVDNPAAKILV 287
G + D VK T+GPKG + I+ R+ +VT DG T+ KSI N A ++
Sbjct: 135 GVNDLADAVKVTMGPKGRNVII---ERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVK 191
Query: 288 DMSKVQDEEVGDGTTSVTV 344
+++ ++ GDGTT TV
Sbjct: 192 QVAEATNKVAGDGTTCATV 210
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 43.6 bits (98), Expect = 2e-04
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Frame = +3
Query: 102 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNP 269
R S G + V TLGP+G + +L G +V NDG TI ++I + +N
Sbjct: 54 RSSLQAGVEKLAAAVAVTLGPRGRNVVL----DEFGSPKVVNDGVTIARAIELADPMENA 109
Query: 270 AAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQ 449
A ++ +++ ++ GDGTT+ +V + +P +I G D
Sbjct: 110 GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG----IDKTVH 165
Query: 450 ALAEASFDHQKNLNEASLRVDLENIARTTLSSK--ILSNHKEHFTKLAVDAVLRLKGSGN 623
+L E + +K D++ +A + + + + E K+ D VL ++ S +
Sbjct: 166 SLVE---ELEKKSRPVKGSGDIKAVAAISAGNDDFVGTMIAEAIDKVGPDGVLSIESSSS 222
Query: 624 LKAIQIIKISGGL-LEESFLDEGFLLNKKVGVHQPKKVENANILI 755
+ +++ G+ ++ ++ F+ N + + + ENA IL+
Sbjct: 223 FET--TVEVEEGMEIDRGYISPQFVTNPEKSL---VEFENARILV 262
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 43.2 bits (97), Expect = 2e-04
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Frame = +3
Query: 120 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNPAAKILV 287
G + + V TLGP+G + +L G +V NDG TI ++I + +N A ++
Sbjct: 55 GVEKLANAVGVTLGPRGRNVVL----DEYGSPKVVNDGVTIARAIELYDPMENAGAALIR 110
Query: 288 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 467
+++ ++ GDGTT+ +V + +P ++ G D L E
Sbjct: 111 EVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKG----IDKTVHGLIE-- 164
Query: 468 FDHQKNLNEASLRVDLENIARTTLSSKIL--SNHKEHFTKLAVDAVLRLKGSGNLKAIQI 641
+ +K D++ +A + + L S + K+ D VL ++ S + +
Sbjct: 165 -ELEKKARPVKGSGDIKAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVD 223
Query: 642 IKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILI 755
++ G ++ ++ F+ N + + + ENA +LI
Sbjct: 224 VE-EGMEIDRGYISPQFVTNLEKSI---VEFENAKVLI 257
>11_04_0305 -
16162063-16162096,16162282-16164365,16165283-16165351,
16168317-16169288,16169548-16169650,16170427-16170509
Length = 1114
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 513 LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESF 677
LEN++ ++ ++K KEH L + RL G LK + ++ L+EE F
Sbjct: 773 LENVSASSYAAKASLCTKEHLIFLKLRCTSRLGDDGLLKEEGLSEMEQRLVEEVF 827
>05_01_0125 - 853691-853984,854027-854659
Length = 308
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -1
Query: 757 AIRMLAFSTFFG*CTPTFLFSKNPSSKNDSSRRPPDILIIWIAFKLPDPFKRKTASTANF 578
A+R+ A S + + F ++ ++RR P++L F P+P R+T+ST F
Sbjct: 43 AVRLRAVSRDWNAALTSDYFILAHRARAAAARRHPELLF----FAPPEP--RRTSSTTTF 96
Query: 577 VKCSL 563
CSL
Sbjct: 97 YACSL 101
>03_01_0281 + 2160480-2162003
Length = 507
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 198 SRRKLRSYPFLWDLKYSLPNLLWQ*HR-*NWTSEQLQLSPLLLHF*G 61
S+RK + P W L LP+LL HR +W + L S L F G
Sbjct: 26 SKRKNTAIPVCWPLIGMLPDLLANRHRIHDWITSLLTASQLNFRFTG 72
>01_01_0004 +
15599-15976,16383-16474,16558-17258,17501-17571,
17968-18057,18142-18321,18531-18593
Length = 524
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 378 LIEQKLHPQTIIA--GWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKI 551
+++ +L PQT I ++ + ++F + +NLN ASL+ ++ I TTL
Sbjct: 316 VLKIQLFPQTYINHHNLKLLQPLVQDFTQGSTFSNVRNLN-ASLQNPMDGIINTTLYISY 374
Query: 552 LSNH 563
LSN+
Sbjct: 375 LSNY 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,719
Number of Sequences: 37544
Number of extensions: 324622
Number of successful extensions: 728
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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