Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4562
(634 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.81
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.9
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 167 HSKFNSHTVYNVQNYRNY 114
+S +N++ YN NY NY
Sbjct: 324 YSNYNNYNNYNNNNYNNY 341
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 259 FRRNITSLSHVTRHNLNLN 315
FRRN + + RHNL+L+
Sbjct: 541 FRRNAATWKNAVRHNLSLH 559
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 271 ITSLSHVTRHNLNLNFK 321
I+SLS+ T HN N N+K
Sbjct: 82 ISSLSNKTIHNNNNNYK 98
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 271 ITSLSHVTRHNLNLNFK 321
I+SLS+ T HN N N+K
Sbjct: 82 ISSLSNKTIHNNNNNYK 98
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 271 ITSLSHVTRHNLNLNFK 321
I+SLS+ T HN N N+K
Sbjct: 82 ISSLSNKTIHNNNNNYK 98
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 271 ITSLSHVTRHNLNLNFK 321
I+SLS+ T HN N N+K
Sbjct: 82 ISSLSNKTIHNNNNNYK 98
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 164 SKFNSHTVYNVQNYRNY 114
S ++ T++N NY+NY
Sbjct: 316 SSLSNKTIHNNNNYKNY 332
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 271 ITSLSHVTRHNLNLNFK 321
I+SLS+ T HN N N+K
Sbjct: 315 ISSLSNKTIHNNNNNYK 331
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 164 SKFNSHTVYNVQNYRNY 114
S ++ T++N NY NY
Sbjct: 305 SSLSNKTIHNNNNYNNY 321
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.5
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = -3
Query: 596 ELTAPVKWLLEPIDI 552
++ P +W++EP D+
Sbjct: 705 QVKVPPRWIVEPTDV 719
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 181 DSYFSDISEFKDSLMP 228
D+YF +FKD L+P
Sbjct: 146 DTYFIMHGDFKDPLIP 161
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 181 DSYFSDISEFKDSLMP 228
D+YF +FKD L+P
Sbjct: 146 DTYFIMHGDFKDPLIP 161
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 181 DSYFSDISEFKDSLMP 228
D+YF +FKD L+P
Sbjct: 197 DTYFIMHGDFKDPLIP 212
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 181 DSYFSDISEFKDSLMP 228
D+YF +FKD L+P
Sbjct: 146 DTYFIMHGDFKDPLIP 161
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 593 LTAPVKWLLEPID 555
+ P +W+LEP D
Sbjct: 675 VNVPPRWILEPTD 687
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 155 NSHTVYNVQNYRNY 114
N++ YN NY NY
Sbjct: 336 NNYNNYNNNNYNNY 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,771
Number of Sequences: 438
Number of extensions: 2806
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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