Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4555
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961...    33   0.18 
05_01_0469 - 3725117-3725170,3725282-3725356,3726938-3727015,372...    33   0.24 
03_05_0582 + 25823862-25824459,25824915-25825063,25825691-258259...    31   0.74 
05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258...    31   1.3  
01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104...    30   1.7  
09_04_0147 - 15099406-15099446,15100171-15100341,15101032-151011...    28   9.1  
03_06_0219 - 32449030-32450247                                         28   9.1  

>09_04_0245 +
           15995689-15995742,15995979-15996075,15996165-15996185,
           15996442-15996573,15996707-15996834,15996919-15997203,
           15997391-15997521,15999700-15999817,16000609-16000703,
           16001437-16001511,16001860-16001911,16002767-16002859,
           16003625-16003690,16003785-16003867,16003942-16004054,
           16005271-16005410,16005569-16005643,16006084-16006160,
           16006426-16006514,16008039-16008085,16009004-16009138,
           16009298-16009345,16009605-16009667,16009709-16009730,
           16010284-16010458,16014250-16014321,16014887-16014958,
           16015904-16016005,16016197-16016225,16016333-16016403,
           16016549-16016597,16016684-16016784,16017495-16017623,
           16017683-16017752,16017975-16018194,16019368-16019389,
           16019457-16019604,16021569-16021693,16022344-16022774,
           16022984-16023110,16023241-16023292,16023351-16023502
          Length = 1461

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 256 GIYVTEVHEGSPAAKSGLRMHDKILQCNGYD 348
           G+Y   V +GSPAA SG+ + D I + +G D
Sbjct: 391 GVYAETVFDGSPAADSGINVGDVITKLDGVD 421


>05_01_0469 -
           3725117-3725170,3725282-3725356,3726938-3727015,
           3727091-3727183,3727582-3727696,3728028-3728158,
           3728243-3728512,3728983-3729120
          Length = 317

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 253 NGIYVTEVHEGSPAAKSGLRMHDKILQC 336
           +G+ V +V  GSPA ++G+RM D I  C
Sbjct: 212 SGLIVAKVSNGSPAERNGIRMGDVIFHC 239


>03_05_0582 +
           25823862-25824459,25824915-25825063,25825691-25825960,
           25826031-25826161,25826545-25826662,25826737-25826829,
           25826987-25827064,25827158-25827224,25828780-25829111
          Length = 611

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 253 NGIYVTEVHEGSPAAKSGLRMHDKILQCNGYDFTMVT 363
           +G+ V EV     A K G+R+ D IL C G + + VT
Sbjct: 416 SGLIVREVFSQCAAEKHGIRVGDVILSCQGENISNVT 452


>05_01_0329 -
           2580083-2580115,2580787-2580864,2580986-2581078,
           2581209-2581326,2583350-2583440,2585167-2585207,
           2585854-2585981,2586078-2586353,2587318-2587472,
           2587557-2587700,2587991-2588567
          Length = 577

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +1

Query: 250 DNGIYVTEVHEGSPAAKSGLRMHDKILQCNG 342
           D G+ V EV EGS A K G+R+ D I   NG
Sbjct: 503 DEGLIVKEVSEGSIAEKLGVRVGDVIKFFNG 533


>01_06_0161 +
           27108920-27109279,27109479-27109598,27110301-27110438,
           27110680-27110784,27110883-27111051,27111507-27111583,
           27111796-27111840,27111984-27112022,27112374-27112457,
           27112846-27112884,27112963-27113025,27113109-27113238,
           27113319-27113374
          Length = 474

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 208 GIDQDFRKSPQGYTDNGIYVTEVHEGSPAAKSGLRMHDKILQCNGYD 348
           GI  + R+ P G   + + V  +    PA  +G+R  D++L  NG D
Sbjct: 171 GIGLNLREIPDGNGSSKLMVLGLILDGPAHSAGVRQGDELLSVNGID 217


>09_04_0147 -
           15099406-15099446,15100171-15100341,15101032-15101139,
           15101974-15102034,15102126-15102266
          Length = 173

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 265 VTEVHEGSPAAKSGLRMHDKILQCNGYDFTMVTHKKAVSY 384
           + E+ +GSPAA  GL++ D+I++    +      + A+++
Sbjct: 132 IDELTDGSPAAVDGLQLWDEIVKFGNVEADRALAESAITF 171


>03_06_0219 - 32449030-32450247
          Length = 405

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +1

Query: 67  FIMAKMAFQHQAGTAMECLSIPITLQKEAGVDPDGREVMKC 189
           F++ K A+  +  TA+E   + +  +K AG+  + RE+++C
Sbjct: 335 FVVLKEAYLARGDTAIEEHPMLVVRRKYAGLMEESREIIRC 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,032,783
Number of Sequences: 37544
Number of extensions: 329662
Number of successful extensions: 721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)