Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4554
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078           30   2.2  
02_02_0426 - 10087547-10089054,10090744-10090762                       28   9.1  

>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
          Length = 455

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2

Query: 532 SSAVYSTLRTEPSASNKVYSPCTASPSRDSC*DL 431
           +S+V    R++PS S+ + SPC ASP RD+  +L
Sbjct: 389 ASSVGPLFRSQPS-SDSLQSPCKASPCRDASFEL 421


>02_02_0426 - 10087547-10089054,10090744-10090762
          Length = 508

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -2

Query: 544 KPWWSSAVYSTLRTEPSASNKVYSPCTASPSRDSC 440
           +PWW     + +   P A      PC  SPS   C
Sbjct: 437 RPWWEKEAATAVPDPPCARVATPEPCFHSPSYYEC 471


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,916
Number of Sequences: 37544
Number of extensions: 189505
Number of successful extensions: 621
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)