Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4552
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77662-1|CAB01201.1|  173|Caenorhabditis elegans Hypothetical pr...    33   0.17 
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical...    29   3.7  
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z77662-1|CAB01201.1|  173|Caenorhabditis elegans Hypothetical
           protein F47B8.1 protein.
          Length = 173

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 317 VIRVFQIFVIHIKILLLFNYIINDEPCTNDTVWNKKIWAIFIYPSII 177
           V RVF  F + + +LLLF  + N+EP     +W+++I A+ +   +I
Sbjct: 46  VSRVFDSFFLFLNLLLLFGAVWNNEPA---LIWSQRIIAVVVVLVVI 89


>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
           protein W03F11.4 protein.
          Length = 1406

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -3

Query: 341 YLNLIIVLVIRVFQIFVIHIKILLLFNYIINDEPCTNDTVWNK 213
           +LN  ++L   + Q+F   I IL +F  I+N    T+ +V+NK
Sbjct: 24  FLNRKLILSCIIMQLFAFGIPILWIF-LIVNATSATHSSVFNK 65


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 446 KLYIHILLFVIQISFLFMVSRFDFVVFCLH*LIDICFTAV-VPNCTRRIVNVFLFFINSF 622
           K+ I    + IQ  FLF++     ++FC    + ICF A+  P      + + LF  +  
Sbjct: 199 KMKISKKFWKIQTGFLFLLGIQVTLLFCFLLFLPICFLAIKAPGSESTSLTIILFIGHHA 258

Query: 623 HLSLVDF 643
            +S + F
Sbjct: 259 TISTIIF 265


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 572 NCTRRIVNVFLFFINSFHLSLVDFHSNWTTELNNLY 679
           NC   I    LF + SF L+L+ +H N  T   NLY
Sbjct: 217 NCFVSIAFYGLFQLLSFILALITYHPNLETSPLNLY 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,613,960
Number of Sequences: 27780
Number of extensions: 310425
Number of successful extensions: 763
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)