Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4552
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   5.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   9.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.7  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   9.7  

>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 263 NYIINDEPCTNDTVWNKKIW 204
           NYI N     ND  +NKK++
Sbjct: 88  NYISNISNYNNDNNYNKKLY 107


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 429 IKENYAECTVRANVICTYTHSLHANAYAYV 340
           ++ NY    + + +  TY   L+++ Y YV
Sbjct: 1   MRHNYIVILILSLLTWTYAEELYSDKYDYV 30


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 83  SLSNNTIHNNNYKYNY 98


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 83  SLSNNTIHNNNYKYNY 98


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 84  SLSNNTIHNNNYKYNY 99


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 84  SLSNNTIHNNNYKYNY 99


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 84  SLSNNTIHNNNYKYNY 99


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 NMDNKYLKNTNYQYDY 329
           ++ N  + N NY+Y+Y
Sbjct: 84  SLSNNTIHNNNYKYNY 99


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
 Frame = -1

Query: 601 KHIYNTTSAVWNYGCK-----TNINQSVQTKNYKIKTRYHKEKANLYY 473
           K I+N  +  +NY  K      N N+ +  KNY I          +YY
Sbjct: 88  KTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQIPVPVPVYY 135


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 429 IKENYAECTVRANVICTYTHSLHANAYAYV 340
           ++ NY    + + +  TY   L+++ Y YV
Sbjct: 1   MRHNYIVILILSLLTWTYAEELYSDKYDYV 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,242
Number of Sequences: 438
Number of extensions: 4029
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)