Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4550
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   2.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.0  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   5.3  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   5.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   5.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.0  

>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 356 NKRNPSDGGHIKGKTKLLFLFNSKNFHIY 270
           +KR P+    ++GK K     NS+NF I+
Sbjct: 27  DKRAPTGHQEMQGKEKNSASLNSENFGIF 55


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 284  NFHIYLPFKPSLD 246
            N H+Y P K SLD
Sbjct: 998  NLHVYAPLKISLD 1010


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 30  LRERTSRRRYSRSREREQKSYKNEREYREYRE 61


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 278 LRERTSRRRYSRSREREQKSYKNEREYREYRE 309


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  LRQRNLPQKYARVRSQSERTVKLEAGFSFLRQ 111
           LR+R   ++Y+R R + +++ K E  +   R+
Sbjct: 279 LRERTSRRRYSRSREREQKSYKNEREYREYRE 310


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 408 RQSINKIPKLLYKINLNKQKES 343
           R++     +  YKIN+N  KE+
Sbjct: 492 RRACMNYERFTYKININSDKET 513


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 408 RQSINKIPKLLYKINLNKQKES 343
           R++     +  YKIN+N  KE+
Sbjct: 492 RRACMNYERFTYKININSDKET 513


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 535 IIYRKFLKVYVPPISHVLKFIHS 467
           I+ ++FL +  PP  ++L++  S
Sbjct: 816 ILLKRFLDITTPPTPNLLRYFAS 838


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,391
Number of Sequences: 438
Number of extensions: 4159
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)