Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4545
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007853-1|AAH07853.2|  504|Homo sapiens THRAP5 protein protein.       33   0.48 
AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.               31   2.0  
AF245481-1|AAL55690.1|  379|Homo sapiens Mlx interactor beta pro...    31   2.0  
AF245480-1|AAL55689.1|  526|Homo sapiens Mlx interactor alpha pr...    31   2.0  
AB020674-1|BAA74890.2|  568|Homo sapiens KIAA0867 protein protein.     31   2.0  
BC130450-1|AAI30451.1|  133|Homo sapiens ATPase, Class I, type 8...    30   4.5  
BC130448-1|AAI30449.1|  133|Homo sapiens LOC158381 protein protein.    30   4.5  
BC035229-1|AAH35229.1|  133|Homo sapiens ATPase, Class I, type 8...    30   4.5  
M64930-3|AAA36493.1|  443|Homo sapiens protein phosphatase-2A su...    29   6.0  
BC031790-1|AAH31790.1|  443|Homo sapiens protein phosphatase 2 (...    29   6.0  
AK125380-1|BAC86150.1|  124|Homo sapiens .  protein.                   29   6.0  

>BC007853-1|AAH07853.2|  504|Homo sapiens THRAP5 protein protein.
          Length = 504

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 66  RYYRIHTCCFRSLLSRKWECDEHCTTKLPSSSTGAIQLCPMSGQSRCLQIRRP 224
           R++    CC  S LS  W   +  T  L + S  +  +C ++G+ RCL +  P
Sbjct: 401 RWWMNAACCPASCLSPAWTGCQPATAWLAACSPSSPFVCSLAGRPRCLAVLPP 453


>AF312918-1|AAG34121.1|  919|Homo sapiens MondoA protein.
          Length = 919

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +1

Query: 106 CPGNGSAMNTAQQNFPQAVPVQYNCAQCQANRDVYRFAGR---HNGARAFKELKELISLD 276
           CP +G A   A +  P     Q NC+     ++V     R   H  A   +     +  D
Sbjct: 681 CPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFD 740

Query: 277 ELNDLIRNRIKPTKRTL 327
            LN LI N  K T   +
Sbjct: 741 MLNSLISNNSKLTSHAI 757


>AF245481-1|AAL55690.1|  379|Homo sapiens Mlx interactor beta
           protein.
          Length = 379

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +1

Query: 106 CPGNGSAMNTAQQNFPQAVPVQYNCAQCQANRDVYRFAGR---HNGARAFKELKELISLD 276
           CP +G A   A +  P     Q NC+     ++V     R   H  A   +     +  D
Sbjct: 288 CPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFD 347

Query: 277 ELNDLIRNRIKPTKRTL 327
            LN LI N  K T   +
Sbjct: 348 MLNSLISNNSKLTSHAI 364


>AF245480-1|AAL55689.1|  526|Homo sapiens Mlx interactor alpha
           protein.
          Length = 526

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +1

Query: 106 CPGNGSAMNTAQQNFPQAVPVQYNCAQCQANRDVYRFAGR---HNGARAFKELKELISLD 276
           CP +G A   A +  P     Q NC+     ++V     R   H  A   +     +  D
Sbjct: 288 CPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFD 347

Query: 277 ELNDLIRNRIKPTKRTL 327
            LN LI N  K T   +
Sbjct: 348 MLNSLISNNSKLTSHAI 364


>AB020674-1|BAA74890.2|  568|Homo sapiens KIAA0867 protein protein.
          Length = 568

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +1

Query: 106 CPGNGSAMNTAQQNFPQAVPVQYNCAQCQANRDVYRFAGR---HNGARAFKELKELISLD 276
           CP +G A   A +  P     Q NC+     ++V     R   H  A   +     +  D
Sbjct: 330 CPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFD 389

Query: 277 ELNDLIRNRIKPTKRTL 327
            LN LI N  K T   +
Sbjct: 390 MLNSLISNNSKLTSHAI 406


>BC130450-1|AAI30451.1|  133|Homo sapiens ATPase, Class I, type 8B
           family pseudogene protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 149 SLKQYRCNTIVPNVRPIEMSTDSQADTMAPERSKSLKNLYRWTNL 283
           S+ QY C   VP    ++ S    A   + E+SKSL+   +  NL
Sbjct: 39  SIGQYICGQAVPETEDLQASVSDMAQQPSEEQSKSLEKPKQKKNL 83


>BC130448-1|AAI30449.1|  133|Homo sapiens LOC158381 protein protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 149 SLKQYRCNTIVPNVRPIEMSTDSQADTMAPERSKSLKNLYRWTNL 283
           S+ QY C   VP    ++ S    A   + E+SKSL+   +  NL
Sbjct: 39  SIGQYICGQAVPETEDLQASVSDMAQQPSEEQSKSLEKPKQKKNL 83


>BC035229-1|AAH35229.1|  133|Homo sapiens ATPase, Class I, type 8B
           family pseudogene protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 149 SLKQYRCNTIVPNVRPIEMSTDSQADTMAPERSKSLKNLYRWTNL 283
           S+ QY C   VP    ++ S    A   + E+SKSL+   +  NL
Sbjct: 39  SIGQYICGQAVPETEDLQASVSDMAQQPSEEQSKSLEKPKQKKNL 83


>M64930-3|AAA36493.1|  443|Homo sapiens protein phosphatase-2A
           subunit-beta protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 HCTTKLPSSSTGAIQLCPMSGQSRC 206
           HC T + SSS G I+LC M   + C
Sbjct: 234 HCNTFVYSSSKGTIRLCDMRASALC 258


>BC031790-1|AAH31790.1|  443|Homo sapiens protein phosphatase 2
           (formerly 2A), regulatory subunit B, beta isoform
           protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 HCTTKLPSSSTGAIQLCPMSGQSRC 206
           HC T + SSS G I+LC M   + C
Sbjct: 234 HCNTFVYSSSKGTIRLCDMRASALC 258


>AK125380-1|BAC86150.1|  124|Homo sapiens .  protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -2

Query: 162 YCLREVLLCSVHRTPISWTIGNENNRYESYNTVRSIFLDSVHL 34
           YCLREV L   H   IS   G E N+    N   S +L S H+
Sbjct: 77  YCLREVRLTLAHPWGISCACGGETNQVG--NNSFSPYLSSFHV 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,822,550
Number of Sequences: 237096
Number of extensions: 1362913
Number of successful extensions: 2992
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2992
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)