Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4543
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153...    29   3.1  
05_01_0484 - 4033169-4033867,4033988-4034051,4035720-4035839,403...    29   5.4  

>03_01_0192 -
           1534013-1535147,1535249-1535370,1535497-1535556,
           1535666-1535764,1535839-1535889,1535974-1536175,
           1536709-1536911,1537264-1537350,1537435-1537589,
           1537640-1537723,1538121-1538325,1538497-1538724
          Length = 876

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 559 LTESTTSSHDSVKKDIPVVKRSGLSEESKVAAEAALARLNQKRENPGFNTSLAAIQAQVR 738
           L E+  S  +  ++++   ++     E+++  E  ++  NQK+ +      L     +V+
Sbjct: 397 LVETLRSKLEDTRENLVTSEKKARELEAQLQDEQLVSANNQKKSD-----KLEMDLRKVK 451

Query: 739 KELENEKASSSEA 777
           KELE+EKA+  EA
Sbjct: 452 KELEHEKAAREEA 464


>05_01_0484 -
           4033169-4033867,4033988-4034051,4035720-4035839,
           4036631-4036827,4037000-4037170,4037292-4037432,
           4037519-4037602,4037852-4037989,4038111-4038136,
           4038292-4038346,4039094-4039198,4039303-4039371,
           4040038-4040112
          Length = 647

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 97  LSKTDITLIFFINYLHKGKLLNFHGHIENCI 5
           L+  D TLI  IN  H GK +   GH++  I
Sbjct: 115 LTARDATLILLINLFHAGKDIPNAGHVQKSI 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,458,445
Number of Sequences: 37544
Number of extensions: 284641
Number of successful extensions: 584
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)