Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4543
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069610-1|AAL39755.1|  441|Drosophila melanogaster LD37137p pro...    59   8e-09
AE013599-2740|AAF57656.2|  441|Drosophila melanogaster CG5469-PD...    59   8e-09
AE013599-2739|AAM68442.1|  441|Drosophila melanogaster CG5469-PC...    59   8e-09
AE013599-2738|AAF57657.2|  441|Drosophila melanogaster CG5469-PB...    59   8e-09
AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p pro...    29   7.1  
AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA...    29   7.1  

>AY069610-1|AAL39755.1|  441|Drosophila melanogaster LD37137p
           protein.
          Length = 441

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 544 GRGHKLT---ESTTSSHDSVKKDIPVV-KRSGLSEESKVAAEAALARLNQKRENPGFNTS 711
           G GHKL    + T SS    K +  V  KR+ +S E++ AA AALAR+++K     FNTS
Sbjct: 27  GTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEARAAASAALARIDKKTSRE-FNTS 85

Query: 712 LAAIQAQVRKELENEKASSSEA 777
           L+A++AQ ++ELE E+    EA
Sbjct: 86  LSAVKAQAKRELEAERRQREEA 107


>AE013599-2740|AAF57656.2|  441|Drosophila melanogaster CG5469-PD,
           isoform D protein.
          Length = 441

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 544 GRGHKLT---ESTTSSHDSVKKDIPVV-KRSGLSEESKVAAEAALARLNQKRENPGFNTS 711
           G GHKL    + T SS    K +  V  KR+ +S E++ AA AALAR+++K     FNTS
Sbjct: 27  GTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEARAAASAALARIDKKTSRE-FNTS 85

Query: 712 LAAIQAQVRKELENEKASSSEA 777
           L+A++AQ ++ELE E+    EA
Sbjct: 86  LSAVKAQAKRELEAERRQREEA 107


>AE013599-2739|AAM68442.1|  441|Drosophila melanogaster CG5469-PC,
           isoform C protein.
          Length = 441

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 544 GRGHKLT---ESTTSSHDSVKKDIPVV-KRSGLSEESKVAAEAALARLNQKRENPGFNTS 711
           G GHKL    + T SS    K +  V  KR+ +S E++ AA AALAR+++K     FNTS
Sbjct: 27  GTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEARAAASAALARIDKKTSRE-FNTS 85

Query: 712 LAAIQAQVRKELENEKASSSEA 777
           L+A++AQ ++ELE E+    EA
Sbjct: 86  LSAVKAQAKRELEAERRQREEA 107


>AE013599-2738|AAF57657.2|  441|Drosophila melanogaster CG5469-PB,
           isoform B protein.
          Length = 441

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 544 GRGHKLT---ESTTSSHDSVKKDIPVV-KRSGLSEESKVAAEAALARLNQKRENPGFNTS 711
           G GHKL    + T SS    K +  V  KR+ +S E++ AA AALAR+++K     FNTS
Sbjct: 27  GTGHKLNSPKQETPSSSSRQKYEAYVPPKRNEISNEARAAASAALARIDKKTSRE-FNTS 85

Query: 712 LAAIQAQVRKELENEKASSSEA 777
           L+A++AQ ++ELE E+    EA
Sbjct: 86  LSAVKAQAKRELEAERRQREEA 107


>AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p
           protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 637 ESKVAAEAALARLNQKRENPGFNTSLAAIQAQV----RKELENE 756
           E++VA E A+      R+NP F+ SLA I        RKEL  E
Sbjct: 55  ENRVALEKAIEETGLLRDNPSFDPSLAKILVTELLFGRKELNGE 98


>AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA,
           isoform A protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 637 ESKVAAEAALARLNQKRENPGFNTSLAAIQAQV----RKELENE 756
           E++VA E A+      R+NP F+ SLA I        RKEL  E
Sbjct: 55  ENRVALEKAIEETGLLRDNPSFDPSLAKILVTELLFGRKELNGE 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,328,221
Number of Sequences: 53049
Number of extensions: 503699
Number of successful extensions: 1170
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)