Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4539
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 39 0.003
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 39 0.004
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 34 0.096
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.6
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.6
U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of c... 30 2.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrat... 30 2.1
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 6.3
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 6.3
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 28 6.3
AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 28 6.3
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 41.1 bits (92), Expect = 8e-04
Identities = 41/176 (23%), Positives = 74/176 (42%)
Frame = +3
Query: 15 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 194
FADDT +Y S K LQ+A + W + ++ +N +K T+
Sbjct: 108 FADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQSK--------------TVH 152
Query: 195 IPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILG 374
+ + RR++ + PI + LG + ++ F H + + A F L
Sbjct: 153 VTVGKRRIDFK------YHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLA 206
Query: 375 RLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 542
++ +K + + LYKT IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 207 NMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 264 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 443
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 444 CIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 542
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 243 PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMS 413
P T+Y +P +P + LG+ DS++TF+PHIK + + L R ++ +
Sbjct: 178 PKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLC 234
Query: 414 LRNKVTLYKTCIRPVMTYASVVFA 485
L+KT I P++ Y S V++
Sbjct: 235 PEFYCNLFKTYILPLIEYGSAVYS 258
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 264 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 443
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 444 CIRPVMTYASVVFA 485
+ P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 144 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 281
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 162 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 281
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 103 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPR 282
+GS G+ST A SS T + + S G+STP P P + S G
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 283 RSN-I*ASPSTVG 318
S+ +PST+G
Sbjct: 1295 TSHGSTQTPSTIG 1307
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 189 LSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 359
++ PLP+ P+ VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of clr
protein 1 protein.
Length = 430
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 603 ESISKYLQSASMRHFDKAARHENLSSWPPVTTFPDPADRMESSRRRPKHVIS 758
E+I + Q M HF H +L S P PDP +ESSR + S
Sbjct: 173 ENIPESKQYHRMHHFKSVISHNSLPSNPNYNNLPDP---LESSRSETSSMYS 221
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 144 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 281
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrate
adaptor proteinSOC-1 protein.
Length = 430
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 603 ESISKYLQSASMRHFDKAARHENLSSWPPVTTFPDPADRMESSRRRPKHVIS 758
E+I + Q M HF H +L S P PDP +ESSR + S
Sbjct: 173 ENIPESKQYHRMHHFKSVISHNSLPSNPNYNNLPDP---LESSRSETSSMYS 221
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 204 PTRRVNTPAPAVRPITMYDQPIPW 275
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 HHGTVVPEVAHRH*P-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 268
HHG H H P H H G + G+ HH H SP H +P H H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 HHGTVVPEVAHRH*P-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNH 250
HHG H H P H H G + G+ HH H SP H +P H
Sbjct: 467 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +1
Query: 79 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCT 258
RP PP +GS T P Q S++G A R P G TPPPPP + +
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP---QDLSTEGNASRRP---PPPPKGTGTPPPPPTGEPQDL 210
Query: 259 TSPYRGPRR 285
++ RR
Sbjct: 211 SAEGYASRR 219
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 79 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCT 258
RP PP +GS + T P Q S +G A R P G +PPPPP + +
Sbjct: 219 RPPPPPKGTGSPTPPPTGEP---QDLSGEGNASRRP---PPPPKGTGSPPPPPTGEPQDL 272
Query: 259 TSPYRGPRR 285
+ RR
Sbjct: 273 SGEGNASRR 281
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 220 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 95
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical
protein T05D4.3 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 STPPPPPF-AQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAT 354
S P PPP+ Q+ P R ++ N ++VG +S PTSRR+ T
Sbjct: 48 SRPAPPPYIGQAIPRVKPIRTFQKGN-----NSVGENSRPTSRRFDT 89
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 563 PRGSDGYPAKTGLNDLKG 510
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 563 PRGSDGYPAKTGLNDLKG 510
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 563 PRGSDGYPAKTGLNDLKG 510
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +1
Query: 130 LTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPRRSNI*ASPS 309
L P +RC K + R ++R T PPP + Y P A P+
Sbjct: 11 LDPEDVRRCLKKVRENQAAR--EMAREPLVTHLPPPSGLPPMVSESYSAPYAQ---APPT 65
Query: 310 TVG*HSAPTSRRYATVPPSF 369
+ G SAP R ++ PP++
Sbjct: 66 STGYPSAPPMPRPSSPPPAY 85
>AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical
protein K07H8.9 protein.
Length = 254
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = -3
Query: 404 TSPTYHRVETS*NEGGTVAYRLDVGAECHPTVEGDA*IFDLRGPRYGLVVHRDWANGGGG 225
T PTY+ + GT A +L+ C + G+ YG +H+ +G
Sbjct: 131 TYPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNH-----SNKMYGNALHKTHGDGSQD 185
Query: 224 GVDAPSRERDAQRGVRR 174
+D P R G RR
Sbjct: 186 AIDLPLRVIVETSGPRR 202
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +3
Query: 180 NTTLSIPLPTRRVNTPAPAVRPITMYDQP----IPWAPK 284
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,332,325
Number of Sequences: 27780
Number of extensions: 476281
Number of successful extensions: 2132
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2120
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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