Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4537
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.034
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 0.97
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.3
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.3
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.3
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 30 1.3
U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protei... 29 1.7
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 29 1.7
AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-... 29 1.7
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 3.9
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 3.9
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical ... 28 5.2
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 27 6.9
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 27 6.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 27 6.9
Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 27 9.1
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.1
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 166 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPV 282
I +P P PV VPQ V VP+P P P+ + + P+ VPV
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 166 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPV 282
I +PIP PV V P VP+P P P+ + + P+ VPV
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 35.1 bits (77), Expect = 0.034
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 172 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPV 282
+P P P+ + P V P+PQP PV + + P+ +P+
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPM 37
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 139 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 261
P + + P+P PV V +P + +P+P P PV V V+
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 139 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 258
P + + + VP P P V VP + +P+P P PV V V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.034
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 172 VPIPHPVAVSVPQYVKVPIPQPYPVH 249
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKGVHQ 300
P P PVA P VP+P P V V + P+ VPV V+Q
Sbjct: 142 PCPAPVAPQ-PVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQ 182
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 181 PHPVA--VSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKGV 294
P PV V VP V+VP+P PV V V P++ P Y V
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAV 188
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 121 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV---EQPIHVPVY 285
H P V V ++ VP+P P V P Y VP P P P V P +PVY
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPVYAQPAPRPMPVY 211
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPV 282
P+ P A + P PQP HV V P+ VPV
Sbjct: 131 PVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPV 166
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 163 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 261
++ P P P V VP PIP P PV ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 0.97
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 148 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 246
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 166 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 267
+ +P+P PV VP+ V P+P P+ V E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 1673
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 1673
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 494
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 494
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 1673
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P V P+ V + P P PV + VE+P P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEPPKEP 1673
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 188 GWGIGTPIFFTTVTWYGFVCSVCVW 114
GWG G FF +GFVCS+CV+
Sbjct: 72 GWGEGN--FFGYSALFGFVCSLCVF 94
>U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protein
11, isoform b protein.
Length = 106
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 GHTHTEHTKPYHV--TVVKKIGVPI-PHPVAVSVPQY-VKVPIPQPYPVHVTVEQPIHVP 279
G H E+ K ++ T + + +P+ P P+ V+ P + VP PQ PV + QP+ P
Sbjct: 10 GKIHFENFKHHNGGGTEIGVMQMPVAPTPIVVAQPPPPMIVPQPQIVPVVQQIMQPMVQP 69
Query: 280 VYKGV 294
+Y V
Sbjct: 70 IYPSV 74
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 GHTHTEHTKPYHV--TVVKKIGVPI-PHPVAVSVPQY-VKVPIPQPYPVHVTVEQPIHVP 279
G H E+ K ++ T + + +P+ P P+ V+ P + VP PQ PV + QP+ P
Sbjct: 136 GKIHFENFKHHNGGGTEIGVMQMPVAPTPIVVAQPPPPMIVPQPQIVPVVQQIMQPMVQP 195
Query: 280 VYKGV 294
+Y V
Sbjct: 196 IYPSV 200
>AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-11
protein.
Length = 232
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 112 GHTHTEHTKPYHV--TVVKKIGVPI-PHPVAVSVPQY-VKVPIPQPYPVHVTVEQPIHVP 279
G H E+ K ++ T + + +P+ P P+ V+ P + VP PQ PV + QP+ P
Sbjct: 136 GKIHFENFKHHNGGGTEIGVMQMPVGPTPIVVAQPPPPMIVPQPQIVPVVQQIMQPMVQP 195
Query: 280 VYKGV 294
+Y V
Sbjct: 196 IYPSV 200
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 97 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 97 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 97 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 97 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 231
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 187 PVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKGVH 297
P+ + Q V V P+ PVH+T++ + +P ++GV+
Sbjct: 796 PLQSAQLQKVHVVTPKA-PVHITIDPKVLIPTHEGVY 831
>AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical
protein Y82E9BL.18 protein.
Length = 499
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 297 VDTLINRYMDRLLHCDVDRVGLRYGHLHVLRDR 199
VD L+ R + R VDR G+R HL++ +R
Sbjct: 22 VDRLVLRKVSRRFRIQVDRHGIRPRHLYICLNR 54
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKG 291
P P V+ P Y +P QP+P+ + QP P G
Sbjct: 20 PTTVPADVTWPHYPMMPFMQPHPLREKMLQPTFDPQIYG 58
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVPVYKG 291
P P V+ P Y +P QP+P+ + QP P G
Sbjct: 20 PTTVPADVTWPHYPMMPFMQPHPLREKMLQPTFDPQIYG 58
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 175 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIHVP 279
P P P + P+ + +P P P+P + P H P
Sbjct: 192 PKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKP 226
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 85 RPFEEWEPEGHTHTEHT-KPYHVTVVKKIGVPIPHPVAVSVPQYVKVP--IPQPYPVHVT 255
+P + +P+ +H KP+ ++ +PIP P+ P +P P+P+P +
Sbjct: 175 KPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPKPML 234
Query: 256 VEQPIHVP 279
+P+ +P
Sbjct: 235 FPKPMPIP 242
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 295 GHPYKQVHG*VAPL*RGPGRVEVWAPSRTAGPTQPPDGESE 173
GHPY+Q +G + P P + + GP PP G E
Sbjct: 741 GHPYQQPYGQMPP----PPHGQYQPQQQQGGPMGPPGGHHE 777
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 295 GHPYKQVHG*VAPL*RGPGRVEVWAPSRTAGPTQPPDGESE 173
GHPY+Q +G + P P + + GP PP G E
Sbjct: 741 GHPYQQPYGQMPP----PPHGQYQPQQQQGGPMGPPGGHHE 777
>Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical
protein B0024.6 protein.
Length = 1161
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 338 QCPMKSKSLIPLRSKKK*RCPSLSPIPSMYPCTNTSTTIREGNTK 472
Q P KS + + K + S+S +PS T +ST G T+
Sbjct: 580 QIPFKSMMTVTKKGKGEHSMRSISSVPSTISSTRSSTLSEVGETR 624
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 GHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYV-KVPIPQPYPVHV 252
G E T H ++G PIP +V P Y+ + P+P P +
Sbjct: 412 GPAEVESTPRNHPAKKDQLGEPIPSRSSVPTPGYLTQEPLPSSLPFQI 459
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 172 VPIPHPVAVSVPQYVKVPIP 231
VPI HP +S+ +K+P+P
Sbjct: 82 VPIYHPTCISILSQMKLPVP 101
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = +1
Query: 88 PFEEWEPEGHTHTEHTKPYHVTV---VKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 246
P+E P H + Y TV ++K P P PV Q P+ Y +
Sbjct: 1682 PYEPLSPPQPAEPNHVEEYQNTVDTIIEKSATPAPAPVTQPAVQPAPGPVEHRYEI 1737
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,767,779
Number of Sequences: 27780
Number of extensions: 302498
Number of successful extensions: 1298
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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