Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4532
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   5.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   7.5  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   9.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   9.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.9  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 284 IFP*YFINLVPQLWVDFLQFRIQ 216
           IF  YF+N   + ++DF+Q  +Q
Sbjct: 122 IFNGYFLNSESKDFIDFIQKNLQ 144


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 402 DDCEIEITATTMVPENTDGNTAVHSGVVCNVCNSP 506
           +D  IE+   + +PE +      H  + C  C+ P
Sbjct: 361 EDGMIEVIPLSAIPEPSKNPAMGHWQMSCVACSPP 395


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 561 QCEAAGNHNEHCMGPSP 611
           QC+A   H  H   P+P
Sbjct: 35  QCQAVNGHCSHLCLPAP 51


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 561 QCEAAGNHNEHCMGPSP 611
           QC+A   H  H   P+P
Sbjct: 35  QCQAVNGHCSHLCLPAP 51


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  YKSKMEDQVPFKVYAFFE 149
           Y  ++ +  PF +Y+F E
Sbjct: 466 YNVELHNSSPFSIYSFLE 483


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 96  YKSKMEDQVPFKVYAFFE 149
           Y  ++ +  PF +Y+F E
Sbjct: 504 YNVELHNSSPFSIYSFLE 521


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 549 PLVLQCEAAG 578
           P VLQCEA G
Sbjct: 793 PAVLQCEAQG 802


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 523 YKCAICHD 546
           YKC +CH+
Sbjct: 260 YKCTLCHE 267


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 395 NIWILAVNV 369
           NIW LAVNV
Sbjct: 6   NIWTLAVNV 14


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 395 NIWILAVNV 369
           NIW LAVNV
Sbjct: 6   NIWTLAVNV 14


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 395 NIWILAVNV 369
           NIW LAVNV
Sbjct: 6   NIWTLAVNV 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,197
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)