Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4529
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094813-1|AAH94813.1| 441|Homo sapiens LRFN4 protein protein. 31 5.0
BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein. 31 5.0
BC027475-1|AAH27475.2| 528|Homo sapiens LRFN4 protein protein. 31 5.0
BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and... 31 5.0
BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein. 31 5.0
AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and... 31 5.0
U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein. 31 6.5
S80437-1|AAB35516.1| 468|Homo sapiens fatty acid synthase protein. 31 6.5
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro... 31 6.5
BC020944-1|AAH20944.1| 426|Homo sapiens actin-like 6B protein. 31 6.5
BC014634-1|AAH14634.2| 353|Homo sapiens FASN protein protein. 31 6.5
BC007909-1|AAH07909.1| 439|Homo sapiens FASN protein protein. 31 6.5
BC007267-1|AAH07267.1| 930|Homo sapiens Unknown (protein for IM... 31 6.5
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro... 31 6.5
AF053356-5|AAC78795.1| 475|Homo sapiens actin like gene protein. 31 6.5
AF041475-1|AAD54678.1| 426|Homo sapiens BAF53b protein. 31 6.5
AC099394-1|AAP21874.1| 426|Homo sapiens unknown protein. 31 6.5
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr... 31 6.5
AB015906-1|BAA74576.1| 426|Homo sapiens actin-related protein h... 31 6.5
>BC094813-1|AAH94813.1| 441|Homo sapiens LRFN4 protein protein.
Length = 441
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 51 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 85
>BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein.
Length = 460
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 245 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 279
>BC027475-1|AAH27475.2| 528|Homo sapiens LRFN4 protein protein.
Length = 528
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 138 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 172
>BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 protein.
Length = 635
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 245 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 279
>BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein.
Length = 541
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 245 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 279
>AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 variant
protein.
Length = 622
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 160 LREHEKPQDLRNVPGTPGVDYPIYHSVPETRFSCE 264
LR +P DL PG+ + +VPE FSCE
Sbjct: 232 LRRLARPDDLETCASPPGLAGRYFWAVPEGEFSCE 266
>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
Length = 2509
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 2251 STTVFHSLASRLSIPTYGLQCTRAAPLD 2278
>S80437-1|AAB35516.1| 468|Homo sapiens fatty acid synthase protein.
Length = 468
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 210 STTVFHSLASRLSIPTYGLQCTRAAPLD 237
>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 2253 STTVFHSLASRLSIPTYGLQCTRAAPLD 2280
>BC020944-1|AAH20944.1| 426|Homo sapiens actin-like 6B protein.
Length = 426
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 418 WYNVDCSQAIEHYKLNADPLKN-PY---VPKQKPEIHQEQPEEYN 540
W+N C++ I+ ++ + + + PY V Q P +H E P YN
Sbjct: 247 WHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYN 291
>BC014634-1|AAH14634.2| 353|Homo sapiens FASN protein protein.
Length = 353
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 95 STTVFHSLASRLSIPTYGLQCTRAAPLD 122
>BC007909-1|AAH07909.1| 439|Homo sapiens FASN protein protein.
Length = 439
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 181 STTVFHSLASRLSIPTYGLQCTRAAPLD 208
>BC007267-1|AAH07267.1| 930|Homo sapiens Unknown (protein for
IMAGE:3138929) protein.
Length = 930
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 672 STTVFHSLASRLSIPTYGLQCTRAAPLD 699
>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 2253 STTVFHSLASRLSIPTYGLQCTRAAPLD 2280
>AF053356-5|AAC78795.1| 475|Homo sapiens actin like gene protein.
Length = 475
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 418 WYNVDCSQAIEHYKLNADPLKN-PY---VPKQKPEIHQEQPEEYN 540
W+N C++ I+ ++ + + + PY V Q P +H E P YN
Sbjct: 247 WHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYN 291
>AF041475-1|AAD54678.1| 426|Homo sapiens BAF53b protein.
Length = 426
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 418 WYNVDCSQAIEHYKLNADPLKN-PY---VPKQKPEIHQEQPEEYN 540
W+N C++ I+ ++ + + + PY V Q P +H E P YN
Sbjct: 247 WHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYN 291
>AC099394-1|AAP21874.1| 426|Homo sapiens unknown protein.
Length = 426
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 418 WYNVDCSQAIEHYKLNADPLKN-PY---VPKQKPEIHQEQPEEYN 540
W+N C++ I+ ++ + + + PY V Q P +H E P YN
Sbjct: 247 WHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYN 291
>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
protein.
Length = 2548
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 227 STTPFRRLDSRVSTCRYTLECTRTLKLD 310
STT F L SR+S Y L+CTR LD
Sbjct: 2290 STTVFHSLASRLSIPTYGLQCTRAAPLD 2317
>AB015906-1|BAA74576.1| 426|Homo sapiens actin-related protein
hArpN alpha protein.
Length = 426
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 418 WYNVDCSQAIEHYKLNADPLKN-PY---VPKQKPEIHQEQPEEYN 540
W+N C++ I+ ++ + + + PY V Q P +H E P YN
Sbjct: 247 WHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYN 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,067,459
Number of Sequences: 237096
Number of extensions: 2462079
Number of successful extensions: 6166
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6138
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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