Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4525
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical...    27   5.7  
U41027-2|AAV28335.1|  447|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U41027-1|AAV28336.1|  480|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U21309-1|AAN73881.2|  458|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical ...    27   10.0 

>AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical
           protein Y75B8A.5 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 146 VL*GCCYEQKYNIFVAIIVILKHF 217
           +L G  Y QK+NIF+  ++IL HF
Sbjct: 3   LLLGTTYVQKFNIFIWKLLILFHF 26


>U41027-2|AAV28335.1|  447|Caenorhabditis elegans Hypothetical
           protein R08E3.4a protein.
          Length = 447

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 43  TKEICASCYIVACYKKHLKKKLEVNFQNQ 129
           T  +C  C    C  +H+K  LE + ++Q
Sbjct: 101 TVHVCPHCNFTTCMSQHMKSHLEAHERHQ 129


>U41027-1|AAV28336.1|  480|Caenorhabditis elegans Hypothetical
           protein R08E3.4b protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 43  TKEICASCYIVACYKKHLKKKLEVNFQNQ 129
           T  +C  C    C  +H+K  LE + ++Q
Sbjct: 101 TVHVCPHCNFTTCMSQHMKSHLEAHERHQ 129


>Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical
           protein K05D4.6 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 22  VFIMFFDT--KEICASCYIVACYKKHLKKKLEVNFQN 126
           V +++F    +E CA  +   C + H K K+EVNF N
Sbjct: 292 VIMLYFHAPYQEFCAKLF---CRRFHSKPKIEVNFLN 325


>U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical
           protein K08F11.3 protein.
          Length = 390

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 347 LIDKCADWMLIGELGCHI 400
           L+D CA+  LIGEL C++
Sbjct: 135 LVDMCAEARLIGELECNL 152


>U21309-1|AAN73881.2|  458|Caenorhabditis elegans Hypothetical
           protein C13B9.2 protein.
          Length = 458

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -2

Query: 452 LIREYYKFFTLYKLLD*IYGSPIRL*ASNPHIYQSKQIRNYYIIVNL 312
           L+RE  K  ++  ++  + G+P+ L AS P +  + Q ++ +II N+
Sbjct: 189 LLREIKKGCSIALIISDVIGNPVELIASGPTVIPAHQ-QDKFIISNI 234


>AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical
           protein Y105E8A.3 protein.
          Length = 746

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 441 IL*IFHVIQTFGLNIWQPNSPISIQSAHLSIK 346
           IL I HV      ++WQ  S I++ S H+ +K
Sbjct: 636 ILEIEHVESYSNAHMWQHKSDINVASVHVQVK 667


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,326,051
Number of Sequences: 27780
Number of extensions: 188701
Number of successful extensions: 390
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)