BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4519
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK092019-1|BAC03791.1| 795|Homo sapiens protein ( Homo sapiens ... 126 7e-29
AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein. 126 7e-29
AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein. 126 7e-29
>AK092019-1|BAC03791.1| 795|Homo sapiens protein ( Homo sapiens
cDNA FLJ34700 fis, clone MESAN2002687. ).
Length = 795
Score = 126 bits (305), Expect = 7e-29
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = +3
Query: 429 LGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILSFCQ 608
LGLMHL++LF E HP + +T E+++KLY MLP+F +V G +P + M EKF D+L F
Sbjct: 23 LGLMHLRRLFTELCHPPRHMTQKEQEEKLYMMLPVFNRVFGNAPPNTMTEKFSDLLQFTT 82
Query: 609 QVSKLMVSEIRKRASNQSTEAASCAIAKFLEIENSEESSNG 731
QVS+LMV+EIR+RASN+STEAAS AI +FLEI SEE+S G
Sbjct: 83 QVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRG 123
>AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.
Length = 3526
Score = 126 bits (305), Expect = 7e-29
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = +3
Query: 429 LGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILSFCQ 608
LGLMHL++LF E HP + +T E+++KLY MLP+F +V G +P + M EKF D+L F
Sbjct: 23 LGLMHLRRLFTELCHPPRHMTQKEQEEKLYMMLPVFNRVFGNAPPNTMTEKFSDLLQFTT 82
Query: 609 QVSKLMVSEIRKRASNQSTEAASCAIAKFLEIENSEESSNG 731
QVS+LMV+EIR+RASN+STEAAS AI +FLEI SEE+S G
Sbjct: 83 QVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRG 123
>AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein.
Length = 2407
Score = 126 bits (305), Expect = 7e-29
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = +3
Query: 429 LGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKVIGTSPSSEMNEKFWDILSFCQ 608
LGLMHL++LF E HP + +T E+++KLY MLP+F +V G +P + M EKF D+L F
Sbjct: 23 LGLMHLRRLFTELCHPPRHMTQKEQEEKLYMMLPVFNRVFGNAPPNTMTEKFSDLLQFTT 82
Query: 609 QVSKLMVSEIRKRASNQSTEAASCAIAKFLEIENSEESSNG 731
QVS+LMV+EIR+RASN+STEAAS AI +FLEI SEE+S G
Sbjct: 83 QVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRG 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,301,751
Number of Sequences: 237096
Number of extensions: 1860986
Number of successful extensions: 10825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10825
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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