Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4519
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U23519-8|AAK31503.3|  734|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AC084155-9|AAO25978.1|  423|Caenorhabditis elegans Hypothetical ...    29   5.1  
AC084155-8|AAG23358.2|  499|Caenorhabditis elegans Hypothetical ...    29   5.1  

>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
           protein C26H9A.2 protein.
          Length = 1334

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 19/109 (17%)
 Frame = +3

Query: 429 LGLMHLKKLFAEYTHPQQPLTDAEKDDKLYNMLPLFCKV------------IGTSPS--- 563
           L L+HL+K F+EY   + P++ +  +D    +LPLF KV            I   P    
Sbjct: 9   LSLLHLRKTFSEYL--KIPVSGSRSNDP-SRLLPLFHKVSNFSWIFFHKMFINNIPQVMS 65

Query: 564 ----SEMNEKFWDILSFCQQVSKLMVSEIRKRASNQSTEAASCAIAKFL 698
                ++N +F +++ F   +  ++V E+R+RA++  T  A+ +IA+FL
Sbjct: 66  MYTPQQLNAEFKEVVHFATFLCSVLVKEVRQRAASTGTIEAAQSIAEFL 114


>Z81536-4|CAB04364.1|  310|Caenorhabditis elegans Hypothetical
           protein F40D4.5 protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 561 SSEMNEKFWDILSFCQQVSKLMVSEIRKRASNQSTEAAS 677
           SSE  + F D+ SF + V  L  S++  +ASN S+ A S
Sbjct: 265 SSEYRDAFIDMWSFLECVKNLKSSKVLHKASNVSSAALS 303


>U23519-8|AAK31503.3|  734|Caenorhabditis elegans Hypothetical
           protein F26G1.6 protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = -3

Query: 297 TLIKSVPISILNNYL--CIESNY 235
           +LIKS P+S +NN+L  C+ SNY
Sbjct: 380 SLIKSKPLSSINNFLMWCLVSNY 402


>AC084155-9|AAO25978.1|  423|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.9b protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 727 LLDSSEF-SISKNFAIAQLAASVLWLLALFLISDTISLETCWQNDNISQN 581
           L DS     +  +F + +   S LWL +L L+ + ISL+  W N  I +N
Sbjct: 254 LFDSENLVEMVNSFEVERQRDSRLWL-SLRLVEEAISLKFDWNNSEIRKN 302


>AC084155-8|AAG23358.2|  499|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.9a protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 727 LLDSSEF-SISKNFAIAQLAASVLWLLALFLISDTISLETCWQNDNISQN 581
           L DS     +  +F + +   S LWL +L L+ + ISL+  W N  I +N
Sbjct: 254 LFDSENLVEMVNSFEVERQRDSRLWL-SLRLVEEAISLKFDWNNSEIRKN 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,290,604
Number of Sequences: 27780
Number of extensions: 315157
Number of successful extensions: 768
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)