Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4518
(775 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117245-1|AAI17246.1| 472|Homo sapiens doublesex and mab-3 rel... 63 1e-09
BC113584-1|AAI13585.1| 472|Homo sapiens doublesex and mab-3 rel... 63 1e-09
AL136365-2|CAB99336.1| 472|Homo sapiens doublesex and mab-3 rel... 63 1e-09
AF193872-1|AAF78891.1| 57|Homo sapiens putative DM domain prot... 56 1e-07
AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM) do... 54 8e-07
BC130437-1|AAI30438.1| 504|Homo sapiens DMRT-like family A1 pro... 52 2e-06
BC130435-1|AAI30436.1| 504|Homo sapiens DMRT-like family A1 pro... 52 2e-06
AL161730-1|CAH73857.1| 504|Homo sapiens DMRT-like family A1 pro... 52 2e-06
AK096011-1|BAC04672.1| 504|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AJ290954-1|CAC16590.1| 263|Homo sapiens putative DMO orthologue... 52 2e-06
BC040847-1|AAH40847.1| 373|Homo sapiens doublesex and mab-3 rel... 52 2e-06
AY442915-1|AAR89620.1| 175|Homo sapiens doublesex and mab-3 rel... 52 2e-06
AY442914-1|AAR89619.1| 275|Homo sapiens doublesex and mab-3 rel... 52 2e-06
AL162131-1|CAB82427.1| 373|Homo sapiens human DMRT1 protein rel... 52 2e-06
AL136365-1|CAB99335.1| 373|Homo sapiens doublesex and mab-3 rel... 52 2e-06
AJ276801-1|CAB82851.1| 373|Homo sapiens doublesex and MAB-3 rel... 52 2e-06
AF130728-1|AAD40474.1| 373|Homo sapiens doublesex and mab-3 rel... 52 2e-06
AJ301581-1|CAC37947.1| 124|Homo sapiens doublesex-mab-3 (DM) do... 52 3e-06
Y19052-1|CAB59891.1| 226|Homo sapiens doublesex-like 2 protein ... 48 3e-05
BC030204-1|AAH30204.1| 226|Homo sapiens DMRT2 protein protein. 48 3e-05
AL358976-3|CAH70589.1| 561|Homo sapiens doublesex and mab-3 rel... 48 3e-05
AL358976-2|CAH70588.1| 226|Homo sapiens doublesex and mab-3 rel... 48 3e-05
AF284225-1|AAF86295.1| 561|Homo sapiens DMRT2/terra-like protei... 48 3e-05
AF284224-1|AAF86293.1| 226|Homo sapiens DMRT2 protein. 48 3e-05
AF284223-1|AAF86291.1| 226|Homo sapiens DMRT2 protein. 48 3e-05
AF130729-1|AAD40475.1| 226|Homo sapiens DM domain-containing tr... 48 3e-05
BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2 pro... 47 7e-05
BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2 pro... 47 7e-05
AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM) do... 47 7e-05
AL365445-2|CAI22836.1| 342|Homo sapiens DMRT-like family B with... 45 3e-04
AK057273-1|BAB71407.1| 342|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AJ291671-1|CAC40654.1| 336|Homo sapiens doublesex-mab-3 (DM) do... 45 3e-04
AK057404-1|BAB71473.1| 224|Homo sapiens protein ( Homo sapiens ... 44 5e-04
BC146824-1|AAI46825.1| 788|Homo sapiens Unknown (protein for IM... 33 1.5
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 32 2.0
AC005175-4|AAC24305.1| 813|Homo sapiens R31449_3 protein. 31 4.6
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 31 6.1
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 31 6.1
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 31 6.1
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 31 6.1
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 31 6.1
>BC117245-1|AAI17246.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXXXLEL-----GIQPP 189
LKGHKRYC+++ CTCEKC L +RQRVMA Q + G PP
Sbjct: 41 LKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPP 100
Query: 190 GMELDRPVPPVVKAPRSPMIPPSAPRSLGSAS 285
G + P PP P P PP L +A+
Sbjct: 101 GDAVAAPQPPPASQPSQPQ-PPRPAAELAAAA 131
>BC113584-1|AAI13585.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXXXLEL-----GIQPP 189
LKGHKRYC+++ CTCEKC L +RQRVMA Q + G PP
Sbjct: 41 LKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPP 100
Query: 190 GMELDRPVPPVVKAPRSPMIPPSAPRSLGSAS 285
G + P PP P P PP L +A+
Sbjct: 101 GDAVAAPQPPPASQPSQPQ-PPRPAAELAAAA 131
>AL136365-2|CAB99336.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXXXLEL-----GIQPP 189
LKGHKRYC+++ CTCEKC L +RQRVMA Q + G PP
Sbjct: 41 LKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPP 100
Query: 190 GMELDRPVPPVVKAPRSPMIPPSAPRSLGSAS 285
G + P PP P P PP L +A+
Sbjct: 101 GDAVAAPQPPPASQPSQPQ-PPRPAAELAAAA 131
>AF193872-1|AAF78891.1| 57|Homo sapiens putative DM domain protein
protein.
Length = 57
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKRYC+++ CTCEKC L +RQRVMA Q
Sbjct: 17 LKGHKRYCRFKDCTCEKCILIIERQRVMAAQ 47
>AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 486
Score = 53.6 bits (123), Expect = 8e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKRYC+++ C C KC L A+RQRVMA Q
Sbjct: 26 LKGHKRYCRWKDCLCAKCTLIAERQRVMAAQ 56
>BC130437-1|AAI30438.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 109 LKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>BC130435-1|AAI30436.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 109 LKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>AL161730-1|CAH73857.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 109 LKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>AK096011-1|BAC04672.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ38692 fis, clone KIDNE2001713, weakly similar to
Oreochromis niloticus sex-determining protein DMO mRNA.
).
Length = 504
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 109 LKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>AJ290954-1|CAC16590.1| 263|Homo sapiens putative DMO orthologue
protein.
Length = 263
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 12 LKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 42
>BC040847-1|AAH40847.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AY442915-1|AAR89620.1| 175|Homo sapiens doublesex and mab-3
related transcription factor 1 c protein.
Length = 175
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AY442914-1|AAR89619.1| 275|Homo sapiens doublesex and mab-3
related transcription factor 1 b protein.
Length = 275
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AL162131-1|CAB82427.1| 373|Homo sapiens human DMRT1 protein
related to Drosophila doublesex protein.
Length = 373
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AL136365-1|CAB99335.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AJ276801-1|CAB82851.1| 373|Homo sapiens doublesex and MAB-3
related transcription factor 1 protein.
Length = 373
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AF130728-1|AAD40474.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 88 LKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AJ301581-1|CAC37947.1| 124|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 124
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 40 RYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXXXLEL-----GIQPPGMELD 204
RYC+++ CTCEKC L +RQRVMA Q + G PPG +
Sbjct: 1 RYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPPGDAVA 60
Query: 205 RPVPPVVKAPRSPMIPPSAPRSLGSAS 285
P PP P P PP L +A+
Sbjct: 61 APQPPPASQPSQPQ-PPRPAAELAAAA 86
>Y19052-1|CAB59891.1| 226|Homo sapiens doublesex-like 2 protein
protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>BC030204-1|AAH30204.1| 226|Homo sapiens DMRT2 protein protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AL358976-3|CAH70589.1| 561|Homo sapiens doublesex and mab-3
related transcription factor 2 protein.
Length = 561
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AL358976-2|CAH70588.1| 226|Homo sapiens doublesex and mab-3
related transcription factor 2 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AF284225-1|AAF86295.1| 561|Homo sapiens DMRT2/terra-like protein
protein.
Length = 561
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AF284224-1|AAF86293.1| 226|Homo sapiens DMRT2 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AF284223-1|AAF86291.1| 226|Homo sapiens DMRT2 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>AF130729-1|AAD40475.1| 226|Homo sapiens DM domain-containing
transcription factor DMRT2 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+C+++ C C C L +RQRVMA Q
Sbjct: 135 LKGHKRFCRWRDCQCANCLLVVERQRVMAAQ 165
>BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 49 GVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 84
>BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 49 GVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 84
>AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM)
domain protein.
Length = 333
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 15 GVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 50
>AL365445-2|CAI22836.1| 342|Homo sapiens DMRT-like family B with
proline-rich C-terminal, 1 protein.
Length = 342
Score = 45.2 bits (102), Expect = 3e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 18 GFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQ 53
>AK057273-1|BAB71407.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ32711 fis, clone TESTI2000707, weakly similar to
DOUBLESEX PROTEIN, MALE-SPECIFIC. ).
Length = 342
Score = 45.2 bits (102), Expect = 3e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 18 GFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQ 53
>AJ291671-1|CAC40654.1| 336|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 336
Score = 45.2 bits (102), Expect = 3e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 12 GFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQ 47
>AK057404-1|BAB71473.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ32842 fis, clone TESTI2003327, weakly similar to
Testis-specific protein. ).
Length = 224
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G LKGHKR C +Q C C KC +R+RVMA Q
Sbjct: 49 GVTAHLKGHKRLCLFQACECHKCVHILERRRVMAAQ 84
>BC146824-1|AAI46825.1| 788|Homo sapiens Unknown (protein for
IMAGE:8860452) protein.
Length = 788
Score = 32.7 bits (71), Expect = 1.5
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 90 RQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGV--G*ACTTSGEGA 233
R +G G +G+ GP SG A A APG G G AC+ + +
Sbjct: 259 RSCSGPGSGSGSGPGPSSGPGAAPAADKEREAPGGGAASGGACSAASSAS 308
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +3
Query: 78 PPYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGATQP 242
PP A G A TGPG+G +A A A + P A + A P
Sbjct: 29 PPAHEDIAVKGTATAAGTGPGTGAAAAAAAAVPPPHPAAAAAAAAAAAAAAAAVP 83
>AC005175-4|AAC24305.1| 813|Homo sapiens R31449_3 protein.
Length = 813
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSAS 285
PPG P PV +PR P PP P S G++S
Sbjct: 752 PPGPPEGHPTSPVT-SPRPPTAPPRHPASSGNSS 784
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMI--PPSAP 264
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMI--PPSAP 264
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMI--PPSAP 264
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMI--PPSAP 264
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 184 PPGMELDRPVPPVVKAPRSPMI--PPSAP 264
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,279,405
Number of Sequences: 237096
Number of extensions: 2110371
Number of successful extensions: 13314
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 11627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13245
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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