Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4518
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 45 7e-05
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 36 0.024
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 35 0.074
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 35 0.074
Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical pr... 32 0.52
AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative tran... 32 0.52
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 32 0.52
Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical pr... 31 1.2
U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical pr... 30 1.6
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 29 2.8
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 29 2.8
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 29 4.9
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 4.9
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 29 4.9
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 29 4.9
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 29 4.9
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 4.9
AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical ... 29 4.9
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical
protein C27C12.6 protein.
Length = 260
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR+CKY+ C CEKC L A+RQRVMA Q
Sbjct: 34 LKGHKRHCKYKECACEKCNLIAERQRVMAAQ 64
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G+ LKGHKRYC+++ C C KC L A+RQRVMA Q
Sbjct: 40 GTTSALKGHKRYCQWKDCMCAKCTLIAERQRVMAAQ 75
>AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical
protein Y43F8C.10 protein.
Length = 250
Score = 44.8 bits (101), Expect = 7e-05
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 25 LKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
LKGHKR C ++ C C KC++ +RQ++MA Q
Sbjct: 129 LKGHKRACPFRDCFCAKCQVVVERQKLMADQ 159
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 117
G +E +GH C+Y+ C CE+C L R+ +M+ Q
Sbjct: 58 GVFVETRGHT--CEYRSCECEQCDLVRKRREIMSTQ 91
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQ 99
K HK+ C+Y C C++C L R+
Sbjct: 150 KNHKKECQYSSCECQQCNLIDSRR 173
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 34.7 bits (76), Expect = 0.074
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 10 GSXIELKGHKR-YCKYQHCTCEKCRLTADRQRVMAKQ 117
G + L+GHKR C++ C C C L R+ +MA Q
Sbjct: 101 GVLVPLRGHKRTMCQFVTCECTLCTLVEHRRNLMAAQ 137
Score = 31.9 bits (69), Expect = 0.52
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQRV 105
KGHK C+Y C C +C + R+++
Sbjct: 41 KGHKPDCRYLKCPCRECTMVEQRRQL 66
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 34.7 bits (76), Expect = 0.074
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 10 GSXIELKGHKR-YCKYQHCTCEKCRLTADRQRVMAKQ 117
G + L+GHKR C++ C C C L R+ +MA Q
Sbjct: 101 GVLVPLRGHKRTMCQFVTCECTLCTLVEHRRNLMAAQ 137
Score = 31.9 bits (69), Expect = 0.52
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQRV 105
KGHK C+Y C C +C + R+++
Sbjct: 41 KGHKPDCRYLKCPCRECTMVEQRRQL 66
>Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical
protein C34D1.2 protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQ 99
K HK C Y CTCEKC L R+
Sbjct: 56 KNHKCECPYADCTCEKCGLVEKRR 79
>Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical
protein C32C4.5a protein.
Length = 175
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQ 99
KGHK+ C Y+ C C C L R+
Sbjct: 22 KGHKQKCPYRTCPCSLCALNTKRR 45
>AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative
transcription factor MAB-23 protein.
Length = 175
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 28 KGHKRYCKYQHCTCEKCRLTADRQ 99
KGHK+ C Y+ C C C L R+
Sbjct: 22 KGHKQKCPYRTCPCSLCALNTKRR 45
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 87 RRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 233
RRQ+ G+ A+G + GSG +C G+ + P G +GA
Sbjct: 97 RRQSYGDSGASGGFSSGGSGGGSCCSCGVGSAGPAGSPGQDGAPGNDGA 145
>Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical
protein C34D1.1 protein.
Length = 83
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEK 75
G LKGHKR C ++ C C K
Sbjct: 47 GRKSRLKGHKRSCPFRECPCAK 68
>U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical
protein K08B12.2a protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKC 78
G + LKGH C + +C+C+ C
Sbjct: 68 GQQVVLKGHASRCPFNNCSCKTC 90
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 102 GNGKANGNQTGPGSGRSACACAGI-RNTAPGDGVG*ACTTSGEGA 233
G+G+++G +G GSG S+ +G A G+G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 102 GNGKANGNQTGPGSGRSACACAGI-RNTAPGDGVG*ACTTSGEGA 233
G+G+++G +G GSG S+ +G A G+G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 187 PGMELDRPVPPVVKAPRSPMIPPSAPRS 270
P + +PPV R PMIPPS P S
Sbjct: 348 PALNRQSTIPPVAMTQR-PMIPPSLPSS 374
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 VENCHRLLEKFHYSWEMMPLVLVIMNYA-RSDLDEASRKIYEGKMIV 546
+ N H L Y W + PLV V+ +A R +++A++ + +V
Sbjct: 677 IRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 723
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 VENCHRLLEKFHYSWEMMPLVLVIMNYA-RSDLDEASRKIYEGKMIV 546
+ N H L Y W + PLV V+ +A R +++A++ + +V
Sbjct: 435 IRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 481
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 VENCHRLLEKFHYSWEMMPLVLVIMNYA-RSDLDEASRKIYEGKMIV 546
+ N H L Y W + PLV V+ +A R +++A++ + +V
Sbjct: 371 IRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 417
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 VENCHRLLEKFHYSWEMMPLVLVIMNYA-RSDLDEASRKIYEGKMIV 546
+ N H L Y W + PLV V+ +A R +++A++ + +V
Sbjct: 600 IRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 646
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 VENCHRLLEKFHYSWEMMPLVLVIMNYA-RSDLDEASRKIYEGKMIV 546
+ N H L Y W + PLV V+ +A R +++A++ + +V
Sbjct: 677 IRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 723
>AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical
protein Y67D8A.3 protein.
Length = 254
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 10 GSXIELKGHKRYCKYQHCTCEKC 78
G+ LKGH C Y+ C+C C
Sbjct: 38 GTYAILKGHAGVCPYKDCSCGTC 60
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 181 QPPGMELDRPVPPVVKAPRSPMIPPSAP 264
QPP + PVP + P P +PP +P
Sbjct: 152 QPPPTPIPTPVPILEPPPPPPPVPPLSP 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,550,748
Number of Sequences: 27780
Number of extensions: 307085
Number of successful extensions: 1361
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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