Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4514
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro...    31   0.94 
AY058462-1|AAL13691.1|  370|Drosophila melanogaster GH26358p pro...    31   0.94 
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB...    31   0.94 
AE014134-1934|AAN10760.1|  370|Drosophila melanogaster CG7300-PA...    31   0.94 
AE014134-1933|AAF52993.2|  886|Drosophila melanogaster CG7300-PB...    31   0.94 
X14475-1|CAA32637.1|  415|Drosophila melanogaster protein ( D.me...    31   1.2  
AY051892-1|AAK93316.1|  349|Drosophila melanogaster LD38046p pro...    30   2.9  
AE014298-2923|AAF49012.1|  804|Drosophila melanogaster CG12531-P...    30   2.9  
AE014298-1424|AAF46566.2|  349|Drosophila melanogaster CG2961-PA...    30   2.9  
AE013599-1641|AAO41395.1|  581|Drosophila melanogaster CG33007-P...    28   8.8  

>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p
           protein.
          Length = 1052

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 29/111 (26%), Positives = 52/111 (46%)
 Frame = +3

Query: 117 SQEYPANGHATIQLAPITLQPTHGAGGLVSGDISQIMNQLSHSLNSGALSLQPSNSVAEF 296
           +  +  N    ++  PI ++ +  A  L +GDI+Q   Q S+++ + ++++Q  N    F
Sbjct: 168 NNNHNCNQMRNVREIPIEVEQSKEALSLRTGDITQ---QASNNVAASSITVQSEN----F 220

Query: 297 HIXXXXXXXXXLSQPQYTYGKLQQYNLVGSLGGSPAHYASGVKGLSSYGST 449
                       SQ   + G + Q   V S   S A+Y+   KG+SS GS+
Sbjct: 221 SADKKAISQSQQSQTMTSNGIISQEKHVSS--ASQANYSMSHKGVSSTGSS 269


>AY058462-1|AAL13691.1|  370|Drosophila melanogaster GH26358p
           protein.
          Length = 370

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +3

Query: 9   SHGDASSINVGAGYS-IGGIKPSFSYDGQ-GSAGLQYASQEYPANGHATIQLAPITLQPT 182
           S G + S   GAG S I     S    G  GSA L        ANGH +     I L   
Sbjct: 220 SVGISGSTGSGAGSSKINAGHLSIGTSGNSGSASLGTNGLSIGANGHNSNTAGSIGLAGA 279

Query: 183 HGAGGLVSGDISQIMNQLSHSLNSGALSLQPSNS 284
           H A  L  G  S I   L+ ++ SG+LSL  S +
Sbjct: 280 HEAASLAHGVASGI---LTPAVGSGSLSLGGSTA 310


>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
           isoform B protein.
          Length = 1052

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 29/111 (26%), Positives = 52/111 (46%)
 Frame = +3

Query: 117 SQEYPANGHATIQLAPITLQPTHGAGGLVSGDISQIMNQLSHSLNSGALSLQPSNSVAEF 296
           +  +  N    ++  PI ++ +  A  L +GDI+Q   Q S+++ + ++++Q  N    F
Sbjct: 168 NNNHNCNQMRNVREIPIEVEQSKEALSLRTGDITQ---QASNNVAASSITVQSEN----F 220

Query: 297 HIXXXXXXXXXLSQPQYTYGKLQQYNLVGSLGGSPAHYASGVKGLSSYGST 449
                       SQ   + G + Q   V S   S A+Y+   KG+SS GS+
Sbjct: 221 SADKKAISQSQQSQTMTSNGIISQEKHVSS--ASQANYSMSHKGVSSTGSS 269


>AE014134-1934|AAN10760.1|  370|Drosophila melanogaster CG7300-PA,
           isoform A protein.
          Length = 370

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +3

Query: 9   SHGDASSINVGAGYS-IGGIKPSFSYDGQ-GSAGLQYASQEYPANGHATIQLAPITLQPT 182
           S G + S   GAG S I     S    G  GSA L        ANGH +     I L   
Sbjct: 220 SVGISGSTGSGAGSSKINAGHLSIGTSGNSGSASLGTNGLSIGANGHNSNTAGSIGLAGA 279

Query: 183 HGAGGLVSGDISQIMNQLSHSLNSGALSLQPSNS 284
           H A  L  G  S I   L+ ++ SG+LSL  S +
Sbjct: 280 HEAASLAHGVASGI---LTPAVGSGSLSLGGSTA 310


>AE014134-1933|AAF52993.2|  886|Drosophila melanogaster CG7300-PB,
            isoform B protein.
          Length = 886

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +3

Query: 9    SHGDASSINVGAGYS-IGGIKPSFSYDGQ-GSAGLQYASQEYPANGHATIQLAPITLQPT 182
            S G + S   GAG S I     S    G  GSA L        ANGH +     I L   
Sbjct: 736  SVGISGSTGSGAGSSKINAGHLSIGTSGNSGSASLGTNGLSIGANGHNSNTAGSIGLAGA 795

Query: 183  HGAGGLVSGDISQIMNQLSHSLNSGALSLQPSNS 284
            H A  L  G  S I   L+ ++ SG+LSL  S +
Sbjct: 796  HEAASLAHGVASGI---LTPAVGSGSLSLGGSTA 826


>X14475-1|CAA32637.1|  415|Drosophila melanogaster protein (
           D.melanogaster Scr (Sex combs reduced) homeotic gene. ).
          Length = 415

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 39  GAGYSIGGIKPSFSYDG-QGSAGLQY--ASQEYPANGHATIQLAPITLQPT 182
           GAG S GG+ PS   +G QGSAG     A+  +PA    T  L P T QPT
Sbjct: 45  GAGGS-GGVVPSGGTNGGQGSAGAATPGANDYFPAAAAYTPNLYPNTPQPT 94


>AY051892-1|AAK93316.1|  349|Drosophila melanogaster LD38046p
           protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
 Frame = +3

Query: 39  GAGYSIGGIKPSFSYDGQGSAGLQYASQEYPANGH-ATIQLAPITLQPTHG---AGGLVS 206
           G G   GG    +SY   G  G  YA      +GH  + Q+  + LQ   G   AGG   
Sbjct: 52  GGGGGGGGGGHGYSYAQGGGGGHGYAQGHGYGHGHGGSPQIIKVILQEGQGYSNAGGSAG 111

Query: 207 GDISQIMNQLSHSLNSGALS 266
           G +S   +  SH    G  S
Sbjct: 112 GIVSSEGHGYSHGHGHGYAS 131


>AE014298-2923|AAF49012.1|  804|Drosophila melanogaster CG12531-PA
           protein.
          Length = 804

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = +2

Query: 377 SWIFGRLPGALRI----WSERAQFLWFNWTSII*SIPVSVFAILSFDIL 511
           +W+F    G   +    WSE   FL + W+ +        +A + FDI+
Sbjct: 214 TWVFVMAAGLFYVDTKTWSEHQGFLPYGWSGVFSGAATCFYAFIGFDII 262


>AE014298-1424|AAF46566.2|  349|Drosophila melanogaster CG2961-PA
           protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
 Frame = +3

Query: 39  GAGYSIGGIKPSFSYDGQGSAGLQYASQEYPANGH-ATIQLAPITLQPTHG---AGGLVS 206
           G G   GG    +SY   G  G  YA      +GH  + Q+  + LQ   G   AGG   
Sbjct: 52  GGGGGGGGGGHGYSYAQGGGGGHGYAQGHGYGHGHGGSPQIIKVILQEGQGYSNAGGSAG 111

Query: 207 GDISQIMNQLSHSLNSGALS 266
           G +S   +  SH    G  S
Sbjct: 112 GIVSSEGHGYSHGHGHGYAS 131


>AE013599-1641|AAO41395.1|  581|Drosophila melanogaster CG33007-PA
           protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 12  HGDASSINVGAGYSIGGIKPSFSYDGQGSAGLQYASQEY 128
           +G  SSI     Y+IGG + SF   G G  G  Y   +Y
Sbjct: 337 YGSNSSIKSAPHYNIGGQRRSFHRGGPGVMGGGYEQFQY 375


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,102,619
Number of Sequences: 53049
Number of extensions: 552229
Number of successful extensions: 1377
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)